Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CFTRP13569 AL589647.1-201ENST00000402485 466 ntBASIC10.02□□□□□ -0.81
CFTRP13569 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC10.02□□□□□ -0.81
CFTRP13569 CBX1P2-201ENST00000453841 458 ntBASIC10.02□□□□□ -0.81
CFTRP13569 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC10.02□□□□□ -0.81
CFTRP13569 AC087672.1-201ENST00000479876 766 ntBASIC10.02□□□□□ -0.81
CFTRP13569 RPEP1-201ENST00000504507 658 ntBASIC10.02□□□□□ -0.81
CFTRP13569 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.02□□□□□ -0.81
CFTRP13569 AC022832.1-201ENST00000530718 645 ntBASIC10.02□□□□□ -0.81
CFTRP13569 AC007494.1-201ENST00000562293 760 ntBASIC10.02□□□□□ -0.81
CFTRP13569 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC10.02□□□□□ -0.81
CFTRP13569 MIR5095-201ENST00000578844 88 ntBASIC10.02□□□□□ -0.81
CFTRP13569 AC087763.1-201ENST00000603391 286 ntBASIC10.02□□□□□ -0.81
CFTRP13569 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CFTRP13569 MAPK10-323ENST00000641493 3207 ntBASIC10.02□□□□□ -0.81
CFTRP13569 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC10.01□□□□□ -0.81
CFTRP13569 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC10.01□□□□□ -0.81
CFTRP13569 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 AL161912.4-201ENST00000623889 2468 ntBASIC10.01□□□□□ -0.81
CFTRP13569 AL390774.1-201ENST00000411924 246 ntBASIC10.01□□□□□ -0.81
CFTRP13569 MYL6P5-201ENST00000412707 459 ntBASIC10.01□□□□□ -0.81
CFTRP13569 BZW1P1-201ENST00000454901 1240 ntBASIC10.01□□□□□ -0.81
CFTRP13569 AC103563.5-201ENST00000455643 364 ntBASIC10.01□□□□□ -0.81
CFTRP13569 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC10.01□□□□□ -0.81
CFTRP13569 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC10.01□□□□□ -0.81
CFTRP13569 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC10.01□□□□□ -0.81
CFTRP13569 MIR4436B2-201ENST00000581415 91 ntBASIC10.01□□□□□ -0.81
CFTRP13569 MIR4436B1-201ENST00000583272 91 ntBASIC10.01□□□□□ -0.81
CFTRP13569 AC126915.2-201ENST00000610957 190 ntBASIC10.01□□□□□ -0.81
CFTRP13569 AL355974.3-201ENST00000617383 467 ntBASIC10.01□□□□□ -0.81
CFTRP13569 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC10.01□□□□□ -0.81
CFTRP13569 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC10.01□□□□□ -0.81
CFTRP13569 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC10.01□□□□□ -0.81
CFTRP13569 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC10.01□□□□□ -0.81
CFTRP13569 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC10.01□□□□□ -0.81
CFTRP13569 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CFTRP13569 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 AL359922.2-201ENST00000581788 3017 ntBASIC10□□□□□ -0.81
CFTRP13569 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
CFTRP13569 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC10□□□□□ -0.81
CFTRP13569 RNA5SP319-201ENST00000362768 119 ntBASIC10□□□□□ -0.81
CFTRP13569 AL645733.1-201ENST00000402250 217 ntBASIC10□□□□□ -0.81
CFTRP13569 RNU6ATAC18P-201ENST00000408413 101 ntBASIC10□□□□□ -0.81
CFTRP13569 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC10□□□□□ -0.81
CFTRP13569 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC10□□□□□ -0.81
CFTRP13569 RN7SL570P-201ENST00000484405 292 ntBASIC10□□□□□ -0.81
CFTRP13569 AC021678.3-201ENST00000517893 476 ntBASIC10□□□□□ -0.81
CFTRP13569 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC10□□□□□ -0.81
CFTRP13569 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC10□□□□□ -0.81
CFTRP13569 OR1F2P-201ENST00000570470 933 ntBASIC10□□□□□ -0.81
CFTRP13569 AL118522.2-201ENST00000616045 615 ntBASIC10□□□□□ -0.81
CFTRP13569 AL390318.1-201ENST00000624564 687 ntBASIC10□□□□□ -0.81
CFTRP13569 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC10□□□□□ -0.81
CFTRP13569 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC10□□□□□ -0.81
CFTRP13569 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC10□□□□□ -0.81
CFTRP13569 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC10□□□□□ -0.81
CFTRP13569 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC10□□□□□ -0.81
CFTRP13569 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC10□□□□□ -0.81
CFTRP13569 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 AC137056.2-201ENST00000624055 1958 ntBASIC9.99□□□□□ -0.81
CFTRP13569 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.99□□□□□ -0.81
CFTRP13569 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CFTRP13569 AC005294.1-201ENST00000355509 281 ntBASIC9.99□□□□□ -0.81
CFTRP13569 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CFTRP13569 VDAC1P2-201ENST00000423609 850 ntBASIC9.99□□□□□ -0.81
CFTRP13569 AC108075.1-201ENST00000424692 529 ntBASIC9.99□□□□□ -0.81
CFTRP13569 OR13K1P-201ENST00000444577 975 ntBASIC9.99□□□□□ -0.81
CFTRP13569 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 RPL7P39-201ENST00000481157 744 ntBASIC9.99□□□□□ -0.81
CFTRP13569 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.99□□□□□ -0.81
CFTRP13569 AC110775.1-201ENST00000513721 462 ntBASIC9.99□□□□□ -0.81
CFTRP13569 OR4A40P-201ENST00000533878 948 ntBASIC9.99□□□□□ -0.81
CFTRP13569 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC9.99□□□□□ -0.81
CFTRP13569 AC012616.1-201ENST00000600294 197 ntBASIC9.99□□□□□ -0.81
CFTRP13569 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CFTRP13569 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
CFTRP13569 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CFTRP13569 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
CFTRP13569 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.99□□□□□ -0.81
CFTRP13569 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.99□□□□□ -0.81
CFTRP13569 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms