Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC109446.4-201ENST00000623235 2755 ntBASIC6.65□□□□□ -1.35
TPM1P09493 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.65□□□□□ -1.35
TPM1P09493 AC024587.1-201ENST00000505925 2157 ntBASIC6.65□□□□□ -1.35
TPM1P09493 AC120036.2-201ENST00000509729 1474 ntBASIC6.65□□□□□ -1.35
TPM1P09493 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
TPM1P09493 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.65□□□□□ -1.35
TPM1P09493 AC004076.2-201ENST00000620532 3323 ntBASIC6.65□□□□□ -1.35
TPM1P09493 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TPM1P09493 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TPM1P09493 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 AC027279.4-201ENST00000624371 2072 ntBASIC6.64□□□□□ -1.35
TPM1P09493 AP001284.1-201ENST00000528393 2118 ntBASIC6.64□□□□□ -1.35
TPM1P09493 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.64□□□□□ -1.35
TPM1P09493 AC005005.4-201ENST00000623789 16698 ntBASIC6.64□□□□□ -1.35
TPM1P09493 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 U3.10-201ENST00000364459 214 ntBASIC6.64□□□□□ -1.35
TPM1P09493 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 AL139100.1-201ENST00000408001 498 ntBASIC6.64□□□□□ -1.35
TPM1P09493 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.64□□□□□ -1.35
TPM1P09493 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 GPN3P1-201ENST00000423883 535 ntBASIC6.64□□□□□ -1.35
TPM1P09493 AL138479.1-201ENST00000426913 484 ntBASIC6.64□□□□□ -1.35
TPM1P09493 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 GTF3AP6-201ENST00000432585 986 ntBASIC6.64□□□□□ -1.35
TPM1P09493 NPM1P23-201ENST00000440193 849 ntBASIC6.64□□□□□ -1.35
TPM1P09493 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.64□□□□□ -1.35
TPM1P09493 POU5F1P5-201ENST00000445059 658 ntBASIC6.64□□□□□ -1.35
TPM1P09493 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.64□□□□□ -1.35
TPM1P09493 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 DEFB109A-201ENST00000482450 265 ntBASIC6.64□□□□□ -1.35
TPM1P09493 OR4D12P-201ENST00000509361 911 ntBASIC6.64□□□□□ -1.35
TPM1P09493 TOMM22P4-201ENST00000511318 336 ntBASIC6.64□□□□□ -1.35
TPM1P09493 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.64□□□□□ -1.35
TPM1P09493 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.64□□□□□ -1.35
TPM1P09493 CHEK2P2-201ENST00000554701 672 ntBASIC6.64□□□□□ -1.35
TPM1P09493 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 AC090241.1-201ENST00000587732 621 ntBASIC6.64□□□□□ -1.35
TPM1P09493 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 AC008555.7-201ENST00000605008 583 ntBASIC6.64□□□□□ -1.35
TPM1P09493 RPL12P48-201ENST00000605620 304 ntBASIC6.64□□□□□ -1.35
TPM1P09493 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.64□□□□□ -1.35
TPM1P09493 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
TPM1P09493 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM1P09493 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
TPM1P09493 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM1P09493 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM1P09493 ADAM24P-201ENST00000398655 2101 ntBASIC6.64□□□□□ -1.35
TPM1P09493 AC022325.1-201ENST00000502748 2199 ntBASIC6.64□□□□□ -1.35
TPM1P09493 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM1P09493 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM1P09493 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM1P09493 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.63□□□□□ -1.35
TPM1P09493 MYL6P5-201ENST00000412707 459 ntBASIC6.63□□□□□ -1.35
TPM1P09493 RPL21P50-201ENST00000417698 477 ntBASIC6.63□□□□□ -1.35
TPM1P09493 RPS7P8-201ENST00000418311 581 ntBASIC6.63□□□□□ -1.35
TPM1P09493 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM1P09493 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 RPSAP40-201ENST00000442343 891 ntBASIC6.63□□□□□ -1.35
TPM1P09493 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM1P09493 AC009244.1-201ENST00000450566 258 ntBASIC6.63□□□□□ -1.35
TPM1P09493 AL929410.2-201ENST00000451170 189 ntBASIC6.63□□□□□ -1.35
TPM1P09493 AL133480.2-201ENST00000456723 487 ntBASIC6.63□□□□□ -1.35
TPM1P09493 ACA64.4-201ENST00000459070 127 ntBASIC6.63□□□□□ -1.35
TPM1P09493 AC012123.2-201ENST00000485809 248 ntBASIC6.63□□□□□ -1.35
TPM1P09493 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM1P09493 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM1P09493 AC111000.6-201ENST00000514471 709 ntBASIC6.63□□□□□ -1.35
TPM1P09493 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.63□□□□□ -1.35
TPM1P09493 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM1P09493 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TPM1P09493 AC008055.1-201ENST00000547032 609 ntBASIC6.63□□□□□ -1.35
TPM1P09493 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM1P09493 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.63□□□□□ -1.35
TPM1P09493 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM1P09493 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.63□□□□□ -1.35
TPM1P09493 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM1P09493 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms