Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 ST13P2-201ENST00000438916 1109 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 TAAR4P-201ENST00000454843 1039 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 PFN1P6-201ENST00000476786 399 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC006539.1-201ENST00000481419 501 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 RPL38P3-201ENST00000484463 213 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.11□□□□□ -1.59
UPK1BO75841 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1BO75841 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.11□□□□□ -1.59
UPK1BO75841 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1BO75841 AC021193.1-201ENST00000511607 420 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1BO75841 NDUFA3P2-201ENST00000531434 232 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC005479.1-201ENST00000554629 451 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1BO75841 AP005262.1-201ENST00000582646 997 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC5.11□□□□□ -1.59
UPK1BO75841 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1BO75841 AC004805.3-201ENST00000603178 310 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AC008555.7-201ENST00000605008 583 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 MRPL57P3-201ENST00000619218 176 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 AL669830.1-201ENST00000621457 656 ntBASIC5.11□□□□□ -1.59
UPK1BO75841 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1BO75841 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.11□□□□□ -1.59
UPK1BO75841 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1BO75841 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1BO75841 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1BO75841 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.1□□□□□ -1.59
UPK1BO75841 RNU1-49P-201ENST00000363468 159 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 RN7SKP78-201ENST00000364711 318 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 U3.14-201ENST00000365363 227 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC5.1□□□□□ -1.59
UPK1BO75841 RPLP1P10-201ENST00000413972 339 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
UPK1BO75841 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 NDUFB4P8-201ENST00000435351 367 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 AC005517.1-201ENST00000452091 489 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 RPS17P5-201ENST00000498293 408 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 AC098976.1-201ENST00000513014 541 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1BO75841 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
UPK1BO75841 AL049869.4-201ENST00000555669 178 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 MRPS21P8-201ENST00000569196 235 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC5.1□□□□□ -1.59
UPK1BO75841 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1BO75841 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.1□□□□□ -1.59
UPK1BO75841 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 ACTG1P22-201ENST00000603793 1099 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 NANOGP3-201ENST00000605855 286 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 AC010998.3-201ENST00000613871 631 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 AC024884.1-201ENST00000620583 399 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 MFSD8-239ENST00000641590 2479 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 AL031595.2-201ENST00000624215 19071 ntBASIC5.1□□□□□ -1.59
UPK1BO75841 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPK1BO75841 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
UPK1BO75841 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1BO75841 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1BO75841 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AC104623.2-202ENST00000623477 4002 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.59
UPK1BO75841 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms