Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORA74.1-201ENST00000516320 180 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 SNORA26.10-201ENST00000516427 141 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 RNA5SP441-201ENST00000516809 88 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 AC006512.2-201ENST00000543250 486 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC092718.4-201ENST00000566639 716 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 QTRT1P1-201ENST00000604344 1078 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 RN7SL261P-201ENST00000613441 282 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 AC080188.3-201ENST00000624842 748 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 AL161901.1-201ENST00000624954 3425 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM38O00635 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM38O00635 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM38O00635 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM38O00635 AC006511.3-201ENST00000624929 1783 ntBASIC6.52□□□□□ -1.37
TRIM38O00635 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
TRIM38O00635 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 OR11H13P-201ENST00000359695 979 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 RBBP4P5-201ENST00000398583 1266 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 UBE2V1P15-201ENST00000407776 448 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM38O00635 AL390879.2-203ENST00000426943 1121 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 MTCO1P51-201ENST00000427672 1060 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 MTCO1P45-201ENST00000431457 267 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 PSMD10P2-201ENST00000432890 672 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 GAPDHP33-201ENST00000443168 1013 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM38O00635 STRADBP1-201ENST00000478954 1281 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 AP002884.1-201ENST00000479691 655 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 RN7SL382P-201ENST00000482631 282 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM38O00635 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 AL845552.1-201ENST00000556820 323 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC004232.1-201ENST00000571388 208 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 AC090079.2-201ENST00000575289 768 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 RN7SL270P-201ENST00000579643 281 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM38O00635 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC097467.4-201ENST00000605504 141 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 OR51C1P-201ENST00000608504 942 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 AC092574.1-201ENST00000609771 420 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM38O00635 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 AC074276.2-201ENST00000619891 348 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 AC004836.1-201ENST00000623032 634 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM38O00635 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM38O00635 AC096992.2-201ENST00000609553 1684 ntBASIC6.51□□□□□ -1.37
TRIM38O00635 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM38O00635 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
TRIM38O00635 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
TRIM38O00635 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM38O00635 RACGAP1P-201ENST00000550663 1879 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM38O00635 Y_RNA.110-201ENST00000363220 99 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 RNU1-84P-201ENST00000365447 164 ntBASIC6.5□□□□□ -1.37
TRIM38O00635 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM38O00635 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms