Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AC130304.1-201ENST00000622942 2385 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 SNORA21-201ENST00000362423 132 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 RNA5SP110-201ENST00000362638 115 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 MIR188-201ENST00000385034 86 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 OR2W4P-201ENST00000406496 926 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 RPS21P8-201ENST00000413365 247 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 RPL7AP14-201ENST00000424041 802 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 RPL12P12-201ENST00000424633 501 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 SEPT14P12-201ENST00000442280 560 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 DNAJC19P5-201ENST00000443295 316 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AC097359.1-201ENST00000447946 463 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AC104164.1-201ENST00000460282 590 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 HMGN1P17-201ENST00000513734 295 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 CR383658.1-201ENST00000514609 734 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 CCDC58P1-201ENST00000578567 430 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 AL138693.1-201ENST00000622219 129 ntBASIC5.4□□□□□ -1.54
TRAV27A0A087WT01 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 AC092070.2-203ENST00000598377 3644 ntBASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 AC013268.3-201ENST00000262716 2324 ntBASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.4□□□□□ -1.55
TRAV27A0A087WT01 AC027575.3-201ENST00000583058 2747 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 SNRPEP6-201ENST00000407465 277 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC064862.5-201ENST00000440618 334 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 OSTCP1-201ENST00000455507 450 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AL603882.1-201ENST00000463059 681 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 OR7E22P-201ENST00000478335 1035 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC083795.1-201ENST00000491760 320 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 MRPS21P8-201ENST00000569196 235 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC073333.2-201ENST00000603589 769 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AL080312.2-201ENST00000613001 630 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AL512652.1-201ENST00000619006 500 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 AC138907.8-201ENST00000623981 2256 ntBASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRAV27A0A087WT01 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRAV27A0A087WT01 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms