Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 CUL4AP1-201ENST00000514750 1863 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RPL31P11-201ENST00000426558 1558 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL353743.3-201ENST00000442109 1468 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 SNORD35A-201ENST00000363389 86 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RN7SKP128-201ENST00000364270 303 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RNA5SP140-201ENST00000364524 92 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 FDPSP5-201ENST00000399474 1057 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 EEF1GP6-201ENST00000402309 905 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 DPPA2P2-201ENST00000418220 897 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 OR52S1P-201ENST00000427016 937 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL354707.3-201ENST00000427308 331 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RPL3P11-201ENST00000434028 1146 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC016908.1-201ENST00000442571 1219 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RANP2-201ENST00000456833 229 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC073594.1-201ENST00000462065 364 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RPL5P15-201ENST00000475870 897 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC124945.1-201ENST00000485133 188 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AF305872.1-201ENST00000485217 471 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 ENPP7P3-201ENST00000509123 241 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RFPL4AP3-201ENST00000515267 345 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 RN7SKP196-201ENST00000516267 345 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 OR6M2P-201ENST00000529831 871 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC023968.1-201ENST00000560719 475 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 LINC00556-201ENST00000569603 412 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC016839.1-201ENST00000578162 867 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC015674.1-201ENST00000578482 267 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL589863.1-201ENST00000595383 631 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC004805.3-201ENST00000603178 310 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC005514.1-201ENST00000623521 208 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 LINC02495-203ENST00000636704 242 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC073869.7-201ENST00000640874 297 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC079776.5-201ENST00000641920 211 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC114774.1-201ENST00000507410 1770 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 Z95331.1-201ENST00000623075 23112 ntBASIC4.07□□□□□ -1.76
SND1-IT1Q9HBX3 AC245100.2-201ENST00000454544 1679 ntBASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 Z83820.1-201ENST00000456978 1499 ntBASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SND1-IT1Q9HBX3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms