Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.46□□□□□ -1.22
RPAP1Q9BWH6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC096921.2-201ENST00000561507 1916 ntBASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 IMMTP1-201ENST00000435590 2219 ntBASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 RN7SL174P-201ENST00000475578 289 ntBASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AC245014.3-201ENST00000618589 347 ntBASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 AL357153.4-201ENST00000620487 1016 ntBASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.45□□□□□ -1.22
RPAP1Q9BWH6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AP001541.1-201ENST00000623322 1904 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AC009779.8-201ENST00000641684 4384 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 RNA5SP510-201ENST00000364697 99 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AL035690.1-201ENST00000490892 383 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 OR5H7P-201ENST00000514084 930 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 Y_RNA.667-201ENST00000516212 107 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AC022826.1-201ENST00000519383 805 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AC092681.3-201ENST00000609463 678 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 AC003992.1-201ENST00000635364 557 ntBASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RPAP1Q9BWH6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 ZNF658B-201ENST00000602828 3408 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 SNORA43.1-201ENST00000364863 140 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 AC068138.1-201ENST00000412635 217 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 RPS17P17-201ENST00000419392 409 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 PPIAP19-201ENST00000486414 492 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 MTATP6P1-201ENST00000514057 681 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms