Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 SYT14P1-202ENST00000600441 1448 ntBASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 ZNF402P-201ENST00000404435 3100 ntBASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDLIM5Q96HC4 AC010401.2-201ENST00000575137 4934 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 Z83820.1-201ENST00000456978 1499 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC010329.1-201ENST00000593903 8328 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 RNA5SP514-201ENST00000363717 111 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 PSMA6P1-201ENST00000400275 741 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC013403.1-201ENST00000436954 263 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AL451063.1-201ENST00000450164 1133 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC099670.1-201ENST00000455141 783 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 RPL34P33-201ENST00000486062 334 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 Y_RNA.710-201ENST00000516975 110 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC092865.1-201ENST00000544395 1023 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AP001823.1-201ENST00000604056 1003 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC010325.3-201ENST00000641084 394 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 AC011503.2-201ENST00000594230 1500 ntBASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDLIM5Q96HC4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 RPL11P4-201ENST00000332269 436 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 NME1P1-201ENST00000420914 382 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 Z82198.3-201ENST00000421145 199 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 PRUNEP1-201ENST00000425846 705 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 AC245884.2-201ENST00000426257 404 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 IGLV3-4-201ENST00000432300 244 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 AL731534.1-201ENST00000434711 269 ntBASIC6.03□□□□□ -1.44
PDLIM5Q96HC4 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms