Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 MGP-201ENST00000228938 694 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VPS33AQ96AX1 SNORD16-201ENST00000362803 99 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS33AQ96AX1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6□□□□□ -1.45
VPS33AQ96AX1 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 AL445238.1-204ENST00000400311 463 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 RN7SKP151-201ENST00000410230 316 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 RN7SKP129-201ENST00000410288 299 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 SEPT7P8-201ENST00000413308 775 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AL161742.1-201ENST00000418154 584 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AL138479.1-201ENST00000426913 484 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 RPL7AP30-201ENST00000482859 796 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6□□□□□ -1.45
VPS33AQ96AX1 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC010287.1-201ENST00000566916 357 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6□□□□□ -1.45
VPS33AQ96AX1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC004805.3-201ENST00000603178 310 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AC027334.1-201ENST00000603257 310 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AC114477.1-201ENST00000605097 605 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 GMCL1P2-201ENST00000605230 823 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC006924.1-201ENST00000610750 559 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 OR8G7P-201ENST00000616658 848 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 AC117503.3-201ENST00000623811 601 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC003992.1-201ENST00000635364 557 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6□□□□□ -1.45
VPS33AQ96AX1 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VPS33AQ96AX1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VPS33AQ96AX1 PROS2P-201ENST00000474651 1951 ntBASIC6□□□□□ -1.45
VPS33AQ96AX1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
VPS33AQ96AX1 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 CCNT2P1-201ENST00000423082 1315 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC005702.3-201ENST00000585345 1447 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC093671.1-201ENST00000624981 2929 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AL080312.1-201ENST00000256654 824 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AL353625.1-202ENST00000366273 571 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC015977.1-201ENST00000418887 292 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC016027.5-201ENST00000427227 210 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC083862.1-201ENST00000427378 1242 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 RAD1P2-201ENST00000446414 663 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AL020997.1-201ENST00000446554 349 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC239798.3-201ENST00000454459 408 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC019084.1-201ENST00000457337 432 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC090058.1-201ENST00000498788 435 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC008945.1-201ENST00000505144 499 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC117525.1-201ENST00000515228 503 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC005000.1-201ENST00000536192 288 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC133552.4-201ENST00000576103 676 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 FCGR1CP-201ENST00000579737 1127 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 GLYATL1P2-202ENST00000588046 902 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms