Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH12P55289 MORF4L1P4-201ENST00000450245 976 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH12P55289 OR9A1P-202ENST00000484361 945 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AL079303.1-201ENST00000486611 463 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH12P55289 AC009567.2-201ENST00000502989 349 ntBASIC5.83□□□□□ -1.48
CDH12P55289 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH12P55289 MINOS1P4-201ENST00000515470 318 ntBASIC5.83□□□□□ -1.48
CDH12P55289 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH12P55289 OR4A42P-201ENST00000531397 938 ntBASIC5.83□□□□□ -1.48
CDH12P55289 SLC25A51P2-201ENST00000535708 889 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH12P55289 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH12P55289 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH12P55289 AC090774.2-201ENST00000584708 322 ntBASIC5.83□□□□□ -1.48
CDH12P55289 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH12P55289 FAM60CP-201ENST00000591086 664 ntBASIC5.83□□□□□ -1.48
CDH12P55289 RPL7AP69-201ENST00000595306 806 ntBASIC5.83□□□□□ -1.48
CDH12P55289 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 AC073111.2-201ENST00000605657 1075 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AL512413.1-201ENST00000606489 382 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC135803.1-201ENST00000608748 565 ntBASIC5.83□□□□□ -1.48
CDH12P55289 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 AC026367.3-201ENST00000619032 590 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC021422.1-201ENST00000621212 473 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC091059.2-201ENST00000623355 614 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH12P55289 LINC02495-203ENST00000636704 242 ntBASIC5.83□□□□□ -1.48
CDH12P55289 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH12P55289 AC022164.1-201ENST00000568767 2673 ntBASIC5.83□□□□□ -1.48
CDH12P55289 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 RPL31P11-201ENST00000426558 1558 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AC096921.2-201ENST00000561507 1916 ntBASIC5.83□□□□□ -1.48
CDH12P55289 AP001541.1-201ENST00000623322 1904 ntBASIC5.83□□□□□ -1.48
CDH12P55289 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH12P55289 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH12P55289 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
CDH12P55289 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CDH12P55289 AL353743.3-201ENST00000442109 1468 ntBASIC5.83□□□□□ -1.48
CDH12P55289 FANCD2P2-201ENST00000437591 1400 ntBASIC5.82□□□□□ -1.48
CDH12P55289 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 AL359976.1-201ENST00000418655 3528 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 CCNT2P1-201ENST00000423082 1315 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDH12P55289 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 AP000568.1-201ENST00000282964 442 ntBASIC5.82□□□□□ -1.48
CDH12P55289 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 RN7SKP151-201ENST00000410230 316 ntBASIC5.82□□□□□ -1.48
CDH12P55289 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 AC006509.1-201ENST00000420788 634 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL139184.1-202ENST00000422303 222 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 AL157884.1-201ENST00000424561 454 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL445528.1-201ENST00000426330 420 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 AP003385.1-201ENST00000426387 893 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AC016027.5-201ENST00000427227 210 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AC083862.1-201ENST00000427378 1242 ntBASIC5.82□□□□□ -1.48
CDH12P55289 ELOCP6-201ENST00000429066 328 ntBASIC5.82□□□□□ -1.48
CDH12P55289 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 ELOCP12-201ENST00000458706 328 ntBASIC5.82□□□□□ -1.48
CDH12P55289 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
CDH12P55289 AC015908.1-201ENST00000478739 476 ntBASIC5.82□□□□□ -1.48
CDH12P55289 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 MTND3P24-201ENST00000506306 329 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDH12P55289 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.82□□□□□ -1.48
CDH12P55289 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH12P55289 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.82□□□□□ -1.48
CDH12P55289 TPRX1P1-201ENST00000557620 319 ntBASIC5.82□□□□□ -1.48
CDH12P55289 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.82□□□□□ -1.48
CDH12P55289 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.82□□□□□ -1.48
CDH12P55289 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms