Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CSNK1A1P48729 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CSNK1A1P48729 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.49□□□□□ -1.53
CSNK1A1P48729 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CSNK1A1P48729 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 MIR188-201ENST00000385034 86 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 RPL34P27-201ENST00000428810 349 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 RAB28P2-201ENST00000454299 641 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC113367.2-201ENST00000505749 160 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC095052.1-201ENST00000509955 863 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC090958.1-201ENST00000511122 351 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC116917.1-201ENST00000520558 305 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 OR6M2P-201ENST00000529831 871 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC090651.1-201ENST00000567865 634 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 MIR4420-201ENST00000583944 77 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC020916.2-201ENST00000591242 360 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AC011500.1-201ENST00000601963 469 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 AP001823.1-201ENST00000604056 1003 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.48□□□□□ -1.53
CSNK1A1P48729 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.48□□□□□ -1.53
CSNK1A1P48729 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSNK1A1P48729 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CSNK1A1P48729 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CSNK1A1P48729 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CSNK1A1P48729 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CSNK1A1P48729 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 RN7SKP250-201ENST00000363924 321 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 RN7SKP151-201ENST00000410230 316 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC099782.1-201ENST00000425889 474 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 PSMD10P2-201ENST00000432890 672 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC096632.2-201ENST00000438139 1239 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 OR7E22P-201ENST00000478335 1035 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 RPL34P33-201ENST00000486062 334 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 ZNF519P4-201ENST00000514008 125 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AP003033.2-201ENST00000528901 805 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 BMS1P16-201ENST00000556075 1147 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC007494.1-201ENST00000562293 760 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC008555.7-201ENST00000605008 583 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 AC099654.15-201ENST00000639802 509 ntBASIC5.47□□□□□ -1.53
CSNK1A1P48729 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CSNK1A1P48729 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CSNK1A1P48729 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms