Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SETP15-201ENST00000412724 337 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 RPL7P53-201ENST00000421245 739 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC097721.1-201ENST00000427150 1253 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC105052.2-201ENST00000434317 794 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AL954705.1-201ENST00000435277 559 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 LSM3P3-201ENST00000436601 306 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 AL592114.2-201ENST00000440142 532 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AL451074.4-201ENST00000447545 470 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC092685.1-201ENST00000447960 1243 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 MGAT2P1-201ENST00000449718 797 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AL035407.2-201ENST00000454090 378 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 MTCO3P16-201ENST00000454456 754 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AL354872.1-201ENST00000456361 967 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 YRDCP3-201ENST00000456507 480 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 RPSAP24-201ENST00000461543 873 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 RPL34P33-201ENST00000486062 334 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 AC113347.3-201ENST00000509113 148 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 C1GALT1P3-201ENST00000522049 819 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC024909.2-201ENST00000553035 286 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC135628.1-201ENST00000568867 534 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 OR7E19P-202ENST00000589942 844 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC024085.1-201ENST00000604299 432 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AL451085.1-201ENST00000604546 690 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AL031601.1-201ENST00000605702 394 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC025162.2-201ENST00000619602 560 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC068792.1-201ENST00000621354 417 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC091931.1-201ENST00000623488 728 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 AC011815.3-201ENST00000624194 473 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 DDX50P1-201ENST00000438163 2400 ntBASIC6.6□□□□□ -1.35
HOXC12P31275 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC12P31275 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HOXC12P31275 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC12P31275 NAMPTP1-201ENST00000440465 2514 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 VN2R3P-201ENST00000422626 1412 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC12P31275 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC12P31275 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 AC138627.1-203ENST00000641872 1680 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
HOXC12P31275 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC12P31275 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC12P31275 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC12P31275 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC12P31275 AL451046.1-201ENST00000406097 534 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 SNORA2C-201ENST00000408564 137 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HOXC12P31275 SNX18P3-201ENST00000424993 835 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 GAPDHP69-201ENST00000425504 1008 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC12P31275 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.59□□□□□ -1.35
HOXC12P31275 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC12P31275 YWHAZP2-201ENST00000440317 728 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC015983.1-201ENST00000441577 373 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC007327.1-201ENST00000447461 264 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 NPM1P13-201ENST00000452663 865 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 OSTCP1-201ENST00000455507 450 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AC013429.1-201ENST00000456604 422 ntBASIC6.59□□□□□ -1.35
HOXC12P31275 AL133480.2-201ENST00000456723 487 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms