Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.55□□□□□ -1.04
RXRBP28702 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.55□□□□□ -1.04
RXRBP28702 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 AC027279.4-201ENST00000624371 2072 ntBASIC8.54□□□□□ -1.04
RXRBP28702 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.54□□□□□ -1.04
RXRBP28702 RN7SKP125-201ENST00000410481 302 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.54□□□□□ -1.04
RXRBP28702 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.54□□□□□ -1.04
RXRBP28702 BX284632.2-201ENST00000421091 399 ntBASIC8.54□□□□□ -1.04
RXRBP28702 KIF4CP-201ENST00000422742 1279 ntBASIC8.54□□□□□ -1.04
RXRBP28702 XKRYP1-201ENST00000423438 492 ntBASIC8.54□□□□□ -1.04
RXRBP28702 BX323845.3-201ENST00000428215 527 ntBASIC8.54□□□□□ -1.04
RXRBP28702 MRPL50P1-201ENST00000431951 384 ntBASIC8.54□□□□□ -1.04
RXRBP28702 XKRYP2-201ENST00000432915 492 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 AC005077.1-201ENST00000449226 375 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.54□□□□□ -1.04
RXRBP28702 AP000648.1-201ENST00000529682 397 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AL442163.2-201ENST00000553912 710 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC8.54□□□□□ -1.04
RXRBP28702 COX6CP7-201ENST00000597056 208 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AC234772.3-201ENST00000602277 528 ntBASIC8.54□□□□□ -1.04
RXRBP28702 FO393422.1-201ENST00000603908 708 ntBASIC8.54□□□□□ -1.04
RXRBP28702 AL031601.1-201ENST00000605702 394 ntBASIC8.54□□□□□ -1.04
RXRBP28702 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.54□□□□□ -1.04
RXRBP28702 MIR8084-201ENST00000614105 89 ntBASIC8.54□□□□□ -1.04
RXRBP28702 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 AP000550.3-201ENST00000637734 379 ntBASIC8.54□□□□□ -1.04
RXRBP28702 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.54□□□□□ -1.04
RXRBP28702 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.54□□□□□ -1.04
RXRBP28702 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RXRBP28702 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 AP003175.1-201ENST00000641383 6658 ntBASIC8.53□□□□□ -1.04
RXRBP28702 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 AC007993.1-201ENST00000621298 2430 ntBASIC8.53□□□□□ -1.04
RXRBP28702 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 AC016582.1-202ENST00000636341 2982 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AF287957.1-201ENST00000607368 1595 ntBASIC8.53□□□□□ -1.04
RXRBP28702 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.53□□□□□ -1.04
RXRBP28702 RNU1-150P-201ENST00000362491 162 ntBASIC8.53□□□□□ -1.04
RXRBP28702 RNU1-134P-201ENST00000362935 165 ntBASIC8.53□□□□□ -1.04
RXRBP28702 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RXRBP28702 RN7SKP281-201ENST00000410472 352 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC016907.1-201ENST00000419483 435 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC093155.2-201ENST00000420734 937 ntBASIC8.53□□□□□ -1.04
RXRBP28702 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 AC114755.4-201ENST00000439114 443 ntBASIC8.53□□□□□ -1.04
RXRBP28702 RPL12P3-201ENST00000440080 396 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 DNAJB5P1-201ENST00000454004 806 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 MTND2P30-201ENST00000456663 382 ntBASIC8.53□□□□□ -1.04
RXRBP28702 COPS8P2-201ENST00000473228 627 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.53□□□□□ -1.04
RXRBP28702 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 PRELID3BP6-201ENST00000503839 571 ntBASIC8.53□□□□□ -1.04
RXRBP28702 RPEP1-201ENST00000504507 658 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 RNA5SP92-201ENST00000516437 110 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.53□□□□□ -1.04
RXRBP28702 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.53□□□□□ -1.04
RXRBP28702 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.53□□□□□ -1.04
RXRBP28702 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.53□□□□□ -1.04
RXRBP28702 MTCYBP33-201ENST00000575007 1130 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.53□□□□□ -1.04
RXRBP28702 AC022387.2-201ENST00000604050 448 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AL133507.1-201ENST00000605269 557 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AL161729.2-201ENST00000605700 456 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC016590.3-201ENST00000611171 753 ntBASIC8.53□□□□□ -1.04
RXRBP28702 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.53□□□□□ -1.04
RXRBP28702 AC090246.1-201ENST00000616499 426 ntBASIC8.53□□□□□ -1.04
RXRBP28702 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC8.53□□□□□ -1.04
RXRBP28702 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms