Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX3O60493 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 AC010132.4-201ENST00000569883 1368 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNX3O60493 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SNX3O60493 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.9□□□□□ -1.46
SNX3O60493 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SNX3O60493 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SNX3O60493 AP002833.3-201ENST00000625075 2265 ntBASIC5.9□□□□□ -1.46
SNX3O60493 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNX3O60493 RNA5SP375-201ENST00000362975 119 ntBASIC5.9□□□□□ -1.46
SNX3O60493 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SNX3O60493 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 RPSAP44-201ENST00000406712 884 ntBASIC5.9□□□□□ -1.46
SNX3O60493 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNX3O60493 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 AC009303.1-201ENST00000426307 352 ntBASIC5.9□□□□□ -1.46
SNX3O60493 HMGN2P27-201ENST00000427352 270 ntBASIC5.9□□□□□ -1.46
SNX3O60493 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SNX3O60493 PPIAP10-201ENST00000438675 458 ntBASIC5.9□□□□□ -1.46
SNX3O60493 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 RPS10P18-201ENST00000442662 495 ntBASIC5.9□□□□□ -1.46
SNX3O60493 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.9□□□□□ -1.46
SNX3O60493 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SNX3O60493 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SNX3O60493 RN7SL369P-201ENST00000477138 299 ntBASIC5.9□□□□□ -1.46
SNX3O60493 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 AC005519.1-201ENST00000554490 601 ntBASIC5.9□□□□□ -1.46
SNX3O60493 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 MTATP6P25-201ENST00000574491 261 ntBASIC5.9□□□□□ -1.46
SNX3O60493 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.9□□□□□ -1.46
SNX3O60493 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.9□□□□□ -1.46
SNX3O60493 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 AC087468.1-201ENST00000604365 630 ntBASIC5.9□□□□□ -1.46
SNX3O60493 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.9□□□□□ -1.46
SNX3O60493 KDM5DP1-201ENST00000622542 298 ntBASIC5.9□□□□□ -1.46
SNX3O60493 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SNX3O60493 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SNX3O60493 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SNX3O60493 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SNX3O60493 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SNX3O60493 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SNX3O60493 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.9□□□□□ -1.47
SNX3O60493 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 AC079248.1-201ENST00000427568 1546 ntBASIC5.89□□□□□ -1.47
SNX3O60493 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.89□□□□□ -1.47
SNX3O60493 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.89□□□□□ -1.47
SNX3O60493 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX3O60493 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SNX3O60493 MIR187-201ENST00000385062 109 ntBASIC5.89□□□□□ -1.47
SNX3O60493 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNX3O60493 GPS2P1-201ENST00000411761 986 ntBASIC5.89□□□□□ -1.47
SNX3O60493 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 RPL18AP14-201ENST00000417685 526 ntBASIC5.89□□□□□ -1.47
SNX3O60493 RFESDP1-201ENST00000422350 461 ntBASIC5.89□□□□□ -1.47
SNX3O60493 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 UBE2V2P1-201ENST00000434717 398 ntBASIC5.89□□□□□ -1.47
SNX3O60493 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.89□□□□□ -1.47
SNX3O60493 OR7L1P-201ENST00000456181 380 ntBASIC5.89□□□□□ -1.47
SNX3O60493 RNU6-775P-201ENST00000459318 96 ntBASIC5.89□□□□□ -1.47
SNX3O60493 CBX5P1-201ENST00000468470 561 ntBASIC5.89□□□□□ -1.47
SNX3O60493 RN7SL868P-201ENST00000485915 303 ntBASIC5.89□□□□□ -1.47
SNX3O60493 RN7SL776P-201ENST00000493390 268 ntBASIC5.89□□□□□ -1.47
SNX3O60493 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 AC093870.1-201ENST00000506837 213 ntBASIC5.89□□□□□ -1.47
SNX3O60493 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
SNX3O60493 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.89□□□□□ -1.47
SNX3O60493 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.89□□□□□ -1.47
SNX3O60493 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.89□□□□□ -1.47
SNX3O60493 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.89□□□□□ -1.47
SNX3O60493 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.89□□□□□ -1.47
SNX3O60493 MIR4660-201ENST00000583549 74 ntBASIC5.89□□□□□ -1.47
SNX3O60493 AC010503.3-201ENST00000594355 540 ntBASIC5.89□□□□□ -1.47
SNX3O60493 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 AL353729.2-201ENST00000605859 1249 ntBASIC5.89□□□□□ -1.47
SNX3O60493 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.89□□□□□ -1.47
SNX3O60493 AC005355.2-201ENST00000625064 484 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms