Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 RNA5SP433-201ENST00000364491 114 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 MIR130B-202ENST00000385018 82 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.29□□□□□ -1.4
SMAD6O43541 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.29□□□□□ -1.4
SMAD6O43541 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 UBE2V2P3-201ENST00000433562 437 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.29□□□□□ -1.4
SMAD6O43541 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 AL353662.1-201ENST00000439099 327 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC097463.1-201ENST00000447288 481 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC092905.1-201ENST00000467527 949 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 RBBP4P1-201ENST00000502424 1276 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AL158068.1-201ENST00000506116 616 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 RNA5SP434-201ENST00000516647 121 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 RNU6-551P-201ENST00000516661 103 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.29□□□□□ -1.4
SMAD6O43541 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.29□□□□□ -1.4
SMAD6O43541 AC021269.1-201ENST00000526860 705 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.29□□□□□ -1.4
SMAD6O43541 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 AC092681.3-201ENST00000609463 678 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC011369.2-201ENST00000624423 1567 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC106730.3-201ENST00000624568 641 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 LYARP1-201ENST00000436977 1501 ntBASIC6.29□□□□□ -1.4
SMAD6O43541 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.29□□□□□ -1.4
SMAD6O43541 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SMAD6O43541 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.29□□□□□ -1.4
SMAD6O43541 HSPD1P9-201ENST00000420325 1636 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.28□□□□□ -1.4
SMAD6O43541 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 AC011416.1-201ENST00000514947 1732 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 AC093225.1-201ENST00000506867 1408 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SMAD6O43541 COX6B1P3-201ENST00000312310 260 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 SNORA21-201ENST00000362423 132 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 RNU11-6P-201ENST00000391127 133 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 RN7SKP240-201ENST00000410583 375 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 USP9YP19-201ENST00000412165 485 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.28□□□□□ -1.4
SMAD6O43541 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.28□□□□□ -1.4
SMAD6O43541 AC117434.1-201ENST00000419971 836 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 OR6C71P-201ENST00000432580 913 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.28□□□□□ -1.4
SMAD6O43541 OR3D1P-201ENST00000438288 955 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.28□□□□□ -1.4
SMAD6O43541 RBMY2AP-201ENST00000445405 1157 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 RBMY2CP-201ENST00000448575 1157 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 RBMY2DP-202ENST00000448881 1157 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 RBMY2BP-202ENST00000451071 1156 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 EIF2S2P5-201ENST00000457635 968 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC009963.3-201ENST00000458090 486 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC073594.1-201ENST00000462065 364 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.28□□□□□ -1.4
SMAD6O43541 MTND3P3-201ENST00000505004 126 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.28□□□□□ -1.4
SMAD6O43541 LDHAP1-201ENST00000509421 992 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC090958.1-201ENST00000511122 351 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.28□□□□□ -1.4
SMAD6O43541 CR383658.1-201ENST00000514609 734 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SMAD6O43541 AC084033.1-201ENST00000550830 633 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 AC090826.1-203ENST00000569235 490 ntBASIC6.28□□□□□ -1.4
SMAD6O43541 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.28□□□□□ -1.4
SMAD6O43541 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SMAD6O43541 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.28□□□□□ -1.4
SMAD6O43541 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms