Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ARSFP1-201ENST00000398758 477 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AL157702.1-201ENST00000398764 426 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 NPM1P38-201ENST00000403835 865 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 SNORA77.2-201ENST00000408571 112 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.89□□□□□ -1.47
SLC28A1O00337 RPL12P16-201ENST00000431098 498 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.89□□□□□ -1.47
SLC28A1O00337 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AL031681.1-201ENST00000443304 400 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 CXCR2P1-202ENST00000443392 1074 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SLC28A1O00337 HIGD1AP16-201ENST00000450986 258 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AL133351.3-201ENST00000454998 193 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC135999.1-201ENST00000478962 479 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.89□□□□□ -1.47
SLC28A1O00337 RN7SL104P-201ENST00000498686 293 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.89□□□□□ -1.47
SLC28A1O00337 RNA5SP206-201ENST00000516703 121 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.89□□□□□ -1.47
SLC28A1O00337 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AL589765.6-201ENST00000601909 549 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 MIR6883-201ENST00000614952 78 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 NCOA4P2-201ENST00000340589 1813 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SLC28A1O00337 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC018628.1-201ENST00000624147 3819 ntBASIC5.89□□□□□ -1.47
SLC28A1O00337 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SLC28A1O00337 CDY11P-201ENST00000447168 1651 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC28A1O00337 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC28A1O00337 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SLC28A1O00337 RNA5SP375-201ENST00000362975 119 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 YWHAZP4-201ENST00000392459 708 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC28A1O00337 RN7SKP144-201ENST00000411108 279 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.88□□□□□ -1.47
SLC28A1O00337 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC021876.1-201ENST00000425959 359 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 CUBNP2-201ENST00000443534 1139 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 MTCO3P17-201ENST00000443775 513 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.88□□□□□ -1.47
SLC28A1O00337 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 RN7SL393P-201ENST00000463588 296 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 RPS4XP17-201ENST00000479057 754 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC090958.1-201ENST00000511122 351 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 RN7SKP5-201ENST00000517045 272 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 OR5D2P-201ENST00000524390 911 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC023310.2-201ENST00000553844 547 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 AC022106.1-201ENST00000612834 766 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.88□□□□□ -1.47
SLC28A1O00337 MAPK10-350ENST00000641777 965 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SLC28A1O00337 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SLC28A1O00337 SYT14P1-202ENST00000600441 1448 ntBASIC5.88□□□□□ -1.47
SLC28A1O00337 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SLC28A1O00337 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms