Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.71□□□□□ -1.49
VAPAQ9P0L0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VAPAQ9P0L0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.71□□□□□ -1.49
VAPAQ9P0L0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 ZNF37CP-201ENST00000406795 241 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 RN7SKP17-201ENST00000411242 351 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 RPS15AP30-201ENST00000420976 390 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AC094019.1-201ENST00000434678 472 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AC234771.4-201ENST00000441416 730 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 RPL36AP55-201ENST00000454114 305 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 RPL34P33-201ENST00000486062 334 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 RN7SKP288-201ENST00000516227 268 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 CYCSP25-201ENST00000525280 316 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AL355974.3-201ENST00000617383 467 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AP000550.3-201ENST00000637734 379 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 AC119674.1-202ENST00000641333 1860 ntBASIC5.71□□□□□ -1.5
VAPAQ9P0L0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.71□□□□□ -1.5
VAPAQ9P0L0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC025470.1-201ENST00000510053 2032 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC139426.3-201ENST00000605648 2059 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC018717.1-201ENST00000457712 1505 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC090220.1-201ENST00000593078 1699 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC130304.1-201ENST00000622942 2385 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 U3.10-201ENST00000364459 214 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 RNU105B-201ENST00000364478 208 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 MYL6P5-201ENST00000412707 459 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 MEAF6P1-201ENST00000416092 327 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 MTND2P12-201ENST00000417560 1252 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC128677.1-201ENST00000436016 442 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 SDC4P-201ENST00000453285 601 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 RARRES2P3-201ENST00000457739 473 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 RN7SL836P-201ENST00000476140 296 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC015524.1-201ENST00000491585 472 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 RNA5SP434-201ENST00000516647 121 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC025283.1-201ENST00000572039 734 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 MIR4732-201ENST00000581873 76 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AC025857.2-201ENST00000602711 238 ntBASIC5.7□□□□□ -1.5
VAPAQ9P0L0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.7□□□□□ -1.5
VAPAQ9P0L0 AL390877.1-201ENST00000605704 214 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms