Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AP000662.1-201ENST00000530952 487 ntBASIC9.11□□□□□ -0.95
SCAPERQ9BY12 OR10G5P-201ENST00000532733 358 ntBASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AC139493.1-201ENST00000604368 397 ntBASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AC116651.1-201ENST00000609724 556 ntBASIC9.11□□□□□ -0.95
SCAPERQ9BY12 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 TEK-202ENST00000406359 3935 ntTSL 2 BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SCAPERQ9BY12 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC105235.1-201ENST00000623208 1816 ntBASIC9.1□□□□□ -0.95
SCAPERQ9BY12 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 GAPDHP24-201ENST00000328713 983 ntBASIC9.1□□□□□ -0.95
SCAPERQ9BY12 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 NME1P1-201ENST00000420914 382 ntBASIC9.1□□□□□ -0.95
SCAPERQ9BY12 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 RN7SL329P-201ENST00000467740 299 ntBASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC089998.1-201ENST00000548575 3141 ntBASIC9.1□□□□□ -0.95
SCAPERQ9BY12 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
SCAPERQ9BY12 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 RAD17P2-201ENST00000451754 1977 ntBASIC9.09□□□□□ -0.95
SCAPERQ9BY12 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 RNA5SP478-201ENST00000364657 115 ntBASIC9.09□□□□□ -0.95
SCAPERQ9BY12 MIR433-201ENST00000384837 93 ntBASIC9.09□□□□□ -0.95
SCAPERQ9BY12 AL390119.1-201ENST00000440329 312 ntBASIC9.09□□□□□ -0.95
SCAPERQ9BY12 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 AC025809.2-201ENST00000625085 1802 ntBASIC9.09□□□□□ -0.95
SCAPERQ9BY12 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
SCAPERQ9BY12 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 RNA5SP375-201ENST00000362975 119 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 MIR640-201ENST00000385086 96 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 NMD3P2-201ENST00000421815 761 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 AL445928.1-201ENST00000435545 222 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 RNU6-615P-201ENST00000516065 106 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 FKBP1AP1-201ENST00000594588 318 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 BIN2P1-201ENST00000504996 1530 ntBASIC9.08□□□□□ -0.96
SCAPERQ9BY12 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SCAPERQ9BY12 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
SCAPERQ9BY12 TANK-205ENST00000405852 2155 ntTSL 5 BASIC9.07□□□□□ -0.96
SCAPERQ9BY12 OFD1P17-201ENST00000437639 3018 ntBASIC9.07□□□□□ -0.96
SCAPERQ9BY12 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC9.07□□□□□ -0.96
SCAPERQ9BY12 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SCAPERQ9BY12 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms