Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AP001646.1-201ENST00000527936 915 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 HNRNPRP2-201ENST00000528421 743 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AP001317.1-201ENST00000531194 960 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 PHBP2-201ENST00000532859 806 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC069240.2-201ENST00000550242 609 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 RPS27AP19-201ENST00000597285 458 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL021707.7-201ENST00000607991 416 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL158063.1-201ENST00000615349 536 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC010133.1-201ENST00000615809 842 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC009120.7-201ENST00000623452 780 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 MIR1322-201ENST00000638013 71 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 NF1P8-201ENST00000415351 1461 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC079178.2-201ENST00000439323 1624 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC099654.3-201ENST00000447087 1546 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AL449283.1-202ENST00000418249 604 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 MTND3P21-201ENST00000433774 331 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC241584.1-201ENST00000438469 1241 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 CUBNP2-201ENST00000443534 1139 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 WASF1P1-201ENST00000447560 1131 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC097262.1-201ENST00000452559 548 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC026782.2-201ENST00000510845 636 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC138938.1-201ENST00000515431 782 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 RNU6-491P-201ENST00000516099 110 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 RN7SKP248-201ENST00000516278 305 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC016957.1-201ENST00000534895 309 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AL450489.1-201ENST00000612071 468 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC095031.1-201ENST00000623685 672 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC015726.3-201ENST00000624501 418 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC010608.2-201ENST00000624830 470 ntBASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.28□□□□□ -1.08
NEDD1Q8NHV4 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms