Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RNU4-39P-201ENST00000362455 127 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 SNORA27.3-201ENST00000364937 134 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC019178.1-201ENST00000392337 440 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 MTND4LP14-201ENST00000429447 288 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 VN1R53P-201ENST00000429536 957 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 ARL4AP4-201ENST00000434170 518 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC009567.2-201ENST00000502989 349 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 ACTR6P1-201ENST00000514311 1104 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC023080.1-201ENST00000551663 931 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 OR4C49P-201ENST00000563891 900 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 RN7SL32P-201ENST00000580514 281 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC012175.1-201ENST00000603755 531 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AL078624.2-201ENST00000605063 554 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 LINC00216-201ENST00000623548 1126 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AL359976.1-201ENST00000418655 3528 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC020633.1-201ENST00000468439 2247 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC022306.1-201ENST00000560489 1562 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 SPATA2P1-201ENST00000431223 2055 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 SMG1P7-201ENST00000565246 2704 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 BIN2P1-201ENST00000504996 1530 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC092634.1-201ENST00000366505 199 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AP003170.5-201ENST00000397185 335 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 MRPS21P5-201ENST00000417885 231 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC006509.1-201ENST00000420788 634 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 Z84478.1-201ENST00000438230 1219 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL500527.1-201ENST00000448532 255 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 TAAR4P-201ENST00000454843 1039 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 SNX18P26-201ENST00000458433 740 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL079303.1-201ENST00000486611 463 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AP003168.1-201ENST00000530091 307 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC068408.1-201ENST00000577406 1144 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 FAM106CP-201ENST00000582212 507 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 MIR6085-201ENST00000618314 110 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 MIR6849-201ENST00000618543 69 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC007204.1-201ENST00000621794 555 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC105105.5-201ENST00000622635 1294 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 AC019080.5-201ENST00000624891 757 ntBASIC5.66□□□□□ -1.5
LINC00346Q8IVM7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms