Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC105235.1-201ENST00000623208 1816 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 MTCO1P8-201ENST00000416914 1523 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 MTCO1P15-201ENST00000529569 1526 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC008957.3-201ENST00000624112 2242 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SNORA64.3-201ENST00000365647 134 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC106901.1-201ENST00000425086 698 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC097721.1-201ENST00000427150 1253 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 FCF1P7-201ENST00000451185 558 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 FTH1P8-201ENST00000498161 514 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC113398.2-201ENST00000507630 558 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC026782.2-201ENST00000510845 636 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SNORD116-30-201ENST00000516468 85 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC025857.1-201ENST00000525252 377 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC027026.1-201ENST00000532323 742 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC090616.1-201ENST00000583895 447 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC011891.2-201ENST00000604949 397 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SNORA74.4-201ENST00000607595 199 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AL451049.1-201ENST00000608672 497 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 MRPL57P1-201ENST00000621486 265 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC089999.3-201ENST00000622440 577 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC243960.7-201ENST00000623532 707 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SAGE3P-201ENST00000619800 1635 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 Z95114.1-201ENST00000624264 14574 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 AC119674.1-202ENST00000641333 1860 ntBASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NUP54Q7Z3B4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 CAP1P2-201ENST00000417455 1409 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC097461.1-201ENST00000568928 2821 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 SNORD16-201ENST00000362803 99 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 RNA5SP514-201ENST00000363717 111 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AP003170.5-201ENST00000397185 335 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 RAB9AP4-201ENST00000415230 609 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 FAM183DP-201ENST00000421987 399 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 BMP6P1-201ENST00000431230 679 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 RN7SL836P-201ENST00000476140 296 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC044810.1-201ENST00000480271 711 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 RPL9P15-201ENST00000491096 532 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 RNU6-551P-201ENST00000516661 103 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AL133399.1-201ENST00000527476 298 ntBASIC5.93□□□□□ -1.46
NUP54Q7Z3B4 AC135983.3-201ENST00000528049 1226 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms