Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AL359219.2-201ENST00000555184 348 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 RAB28P4-201ENST00000622233 665 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC114546.4-201ENST00000624413 369 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC079753.1-201ENST00000623243 3868 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 RNA5SP308-201ENST00000362532 115 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 RNA5SP350-201ENST00000363298 111 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC006509.1-201ENST00000420788 634 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 RPSAP65-201ENST00000429660 595 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC013410.1-201ENST00000436223 1232 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 HMGN1P32-201ENST00000441744 256 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AL034369.1-201ENST00000453808 477 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 RPL23AP68-201ENST00000480924 445 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC138832.1-201ENST00000522871 556 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC084851.2-201ENST00000530377 364 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC018692.2-201ENST00000624130 348 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 AC132825.8-201ENST00000640783 297 ntBASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.75□□□□□ -1.49
TMEM53Q6P2H8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 PPIAP24-201ENST00000328558 471 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AC010240.2-201ENST00000445363 1205 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 MGAT2P1-201ENST00000449718 797 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 RPL19P11-201ENST00000495944 589 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AC091965.3-201ENST00000506236 208 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 OR52K3P-201ENST00000531655 943 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 HMGN1P26-201ENST00000558737 303 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AC027216.1-201ENST00000577726 685 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 COX6CP7-201ENST00000597056 208 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 AL390877.1-201ENST00000605704 214 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 SNORD96A-201ENST00000606577 79 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 MIR6849-201ENST00000618543 69 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 MIR6503-201ENST00000622884 86 ntBASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.74□□□□□ -1.49
TMEM53Q6P2H8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms