Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 SNRPCP6-201ENST00000528310 210 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 NPM1P42-201ENST00000560329 862 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC126323.4-201ENST00000566935 234 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC006120.1-201ENST00000579375 546 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 SNORD39.2-201ENST00000579995 76 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 FAM106CP-201ENST00000582212 507 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 WDR45BP1-201ENST00000583470 1029 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.64□□□□□ -1.51
SCN1BQ07699 BUB1P1-201ENST00000603541 607 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC009283.1-201ENST00000615852 645 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AF117829.2-201ENST00000619538 361 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC103564.3-201ENST00000621194 220 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC022726.2-201ENST00000634673 547 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 BCORP1-203ENST00000513194 5093 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC023245.2-201ENST00000530760 2978 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
SCN1BQ07699 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN1BQ07699 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SCN1BQ07699 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SCN1BQ07699 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SCN1BQ07699 MIR99A-201ENST00000384906 81 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 RNU1-56P-201ENST00000391303 164 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 AL365220.1-201ENST00000432923 399 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN1BQ07699 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.63□□□□□ -1.51
SCN1BQ07699 RPL31P20-201ENST00000449593 360 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AL929410.2-201ENST00000451170 189 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC090602.1-201ENST00000469695 252 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AL035690.1-201ENST00000490892 383 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 RN7SL284P-201ENST00000498823 275 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC091849.1-201ENST00000509920 121 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC114940.1-201ENST00000512162 1265 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC091304.4-201ENST00000565703 620 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN1BQ07699 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.63□□□□□ -1.51
SCN1BQ07699 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC125494.2-201ENST00000602431 657 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AL356986.1-201ENST00000604085 341 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AC090953.1-201ENST00000604305 1092 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 MIR6736-201ENST00000616799 59 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 AC017037.4-201ENST00000624526 826 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC116667.2-201ENST00000641075 823 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC114876.1-201ENST00000490962 1366 ntBASIC5.63□□□□□ -1.51
SCN1BQ07699 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SCN1BQ07699 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SCN1BQ07699 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SCN1BQ07699 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.63□□□□□ -1.51
SCN1BQ07699 AC092692.1-201ENST00000623625 2595 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms