Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AP3S2P59780 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
AP3S2P59780 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP3S2P59780 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AP3S2P59780 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
AP3S2P59780 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
AP3S2P59780 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.19□□□□□ -1.58
AP3S2P59780 MRRFP1-201ENST00000435941 1675 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
AP3S2P59780 MIR345-201ENST00000362114 98 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 MIR614-201ENST00000385082 90 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 RNU1-56P-201ENST00000391303 164 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 AC087752.1-201ENST00000391360 558 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 MYL6P5-201ENST00000412707 459 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.19□□□□□ -1.58
AP3S2P59780 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 MED28P3-201ENST00000444288 531 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 CCNJP1-201ENST00000450600 1149 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 AC022080.2-201ENST00000452932 533 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 RPL12P24-201ENST00000474907 486 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.19□□□□□ -1.58
AP3S2P59780 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC5.19□□□□□ -1.58
AP3S2P59780 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.19□□□□□ -1.58
AP3S2P59780 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.19□□□□□ -1.58
AP3S2P59780 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC5.19□□□□□ -1.58
AP3S2P59780 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 FRG2MP-201ENST00000613317 856 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 AC005858.3-201ENST00000624756 589 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 SNX18P12-201ENST00000624821 759 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 LINC02495-203ENST00000636704 242 ntBASIC5.19□□□□□ -1.58
AP3S2P59780 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
AP3S2P59780 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.19□□□□□ -1.58
AP3S2P59780 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
AP3S2P59780 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
AP3S2P59780 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AP3S2P59780 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 TCP11X1-202ENST00000622971 1372 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S2P59780 Z95331.1-201ENST00000623075 23112 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S2P59780 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S2P59780 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 AC024587.1-201ENST00000505925 2157 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
AP3S2P59780 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AP3S2P59780 PPIAP24-201ENST00000328558 471 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 RN7SKP185-201ENST00000362813 326 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 RN7SKP77-201ENST00000363261 353 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 RN7SKP130-201ENST00000364924 301 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 RNA5SP355-201ENST00000365317 135 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 MIR99A-201ENST00000384906 81 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AP3S2P59780 HIST1H2BPS2-201ENST00000402707 340 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S2P59780 AC023141.1-201ENST00000419418 379 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 AC000089.1-201ENST00000424559 801 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S2P59780 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 CBX1P2-201ENST00000453841 458 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 RN7SL145P-201ENST00000469955 296 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S2P59780 RN7SKP288-201ENST00000516227 268 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 AC138832.1-201ENST00000522871 556 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 AP003041.2-201ENST00000525666 1180 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S2P59780 AP001646.2-201ENST00000528645 1156 ntBASIC5.18□□□□□ -1.58
AP3S2P59780 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S2P59780 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S2P59780 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S2P59780 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms