Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC090971.3-201ENST00000557871 1041 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.51□□□□□ -1.37
GFRA1P56159 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.51□□□□□ -1.37
GFRA1P56159 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 AL031281.1-201ENST00000604049 488 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 AC024085.1-201ENST00000604299 432 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 AL159169.2-201ENST00000610061 1269 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 MTND4P4-201ENST00000439033 1366 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 MFSD8-218ENST00000641186 4448 ntBASIC6.51□□□□□ -1.37
GFRA1P56159 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
GFRA1P56159 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GFRA1P56159 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
GFRA1P56159 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
GFRA1P56159 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 SAMMSON-222ENST00000641901 2727 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC027279.4-201ENST00000624371 2072 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 SGO1P2-201ENST00000429458 1589 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 METTL21EP-201ENST00000298105 713 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GFRA1P56159 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GFRA1P56159 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GFRA1P56159 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 RNA5SP218-201ENST00000363188 109 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 MIR27A-201ENST00000385073 78 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GFRA1P56159 ATP5F1P3-201ENST00000397213 657 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 RPS3AP26-201ENST00000398259 784 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AL079342.2-201ENST00000403367 482 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC024937.2-201ENST00000411669 1242 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AL662791.3-201ENST00000413771 776 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 VTA1P1-201ENST00000414044 866 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC009362.1-201ENST00000427253 406 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC098826.1-201ENST00000433943 471 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GFRA1P56159 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 OSTCP2-201ENST00000437956 444 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 RPS7P4-201ENST00000444127 582 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC093166.3-201ENST00000448785 303 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 RPS27AP2-201ENST00000457576 465 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 RN7SL456P-201ENST00000469290 295 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 SYPL1P1-201ENST00000473622 768 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 MYL6P4-201ENST00000477911 453 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 RPL23AP37-201ENST00000479658 549 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC105420.1-201ENST00000504389 582 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 NACAP6-201ENST00000509572 622 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 RPL7L1P7-201ENST00000509986 724 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 IGHV3-63-201ENST00000518422 341 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.5□□□□□ -1.37
GFRA1P56159 SLC25A51P2-201ENST00000535708 889 ntBASIC6.5□□□□□ -1.37
GFRA1P56159 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.5□□□□□ -1.37
GFRA1P56159 AC068305.2-201ENST00000550567 1205 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms