Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 AC069157.1-201ENST00000421749 137 ntBASIC8.07□□□□□ -1.12
VARSP26640 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 AL513185.2-201ENST00000425543 193 ntBASIC8.07□□□□□ -1.12
VARSP26640 MTCO2P12-201ENST00000427426 682 ntBASIC8.07□□□□□ -1.12
VARSP26640 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.07□□□□□ -1.12
VARSP26640 AL365184.2-201ENST00000431139 435 ntBASIC8.07□□□□□ -1.12
VARSP26640 EIF3IP1-201ENST00000433048 967 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC243962.1-201ENST00000441512 579 ntBASIC8.07□□□□□ -1.12
VARSP26640 RHEBP1-201ENST00000448647 556 ntBASIC8.07□□□□□ -1.12
VARSP26640 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 EIF3LP2-201ENST00000457262 807 ntBASIC8.07□□□□□ -1.12
VARSP26640 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 AC016687.1-201ENST00000482574 353 ntBASIC8.07□□□□□ -1.12
VARSP26640 GAPDHP22-201ENST00000491037 413 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC027338.2-201ENST00000504382 526 ntBASIC8.07□□□□□ -1.12
VARSP26640 DUTP7-201ENST00000507982 486 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC8.07□□□□□ -1.12
VARSP26640 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 PSAT1P1-201ENST00000518968 1106 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.07□□□□□ -1.12
VARSP26640 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 KCTD9P6-201ENST00000522306 950 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 MIR3913-1-201ENST00000577744 102 ntBASIC8.07□□□□□ -1.12
VARSP26640 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.07□□□□□ -1.12
VARSP26640 MIR4450-201ENST00000583589 65 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 MIR7156-201ENST00000620979 60 ntBASIC8.07□□□□□ -1.12
VARSP26640 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
VARSP26640 AL359880.1-201ENST00000621879 266 ntBASIC8.07□□□□□ -1.12
VARSP26640 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
VARSP26640 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 CCT4P2-201ENST00000233836 1548 ntBASIC8.07□□□□□ -1.12
VARSP26640 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.07□□□□□ -1.12
VARSP26640 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.07□□□□□ -1.12
VARSP26640 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 AC093225.1-201ENST00000506867 1408 ntBASIC8.06□□□□□ -1.12
VARSP26640 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
VARSP26640 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
VARSP26640 Y_RNA.279-201ENST00000364763 95 ntBASIC8.06□□□□□ -1.12
VARSP26640 Y_RNA.296-201ENST00000364930 108 ntBASIC8.06□□□□□ -1.12
VARSP26640 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 SNORA14B-201ENST00000384452 135 ntBASIC8.06□□□□□ -1.12
VARSP26640 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.06□□□□□ -1.12
VARSP26640 AIMP1P1-201ENST00000418670 937 ntBASIC8.06□□□□□ -1.12
VARSP26640 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.06□□□□□ -1.12
VARSP26640 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.06□□□□□ -1.12
VARSP26640 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 FBP2P1-202ENST00000424473 530 ntBASIC8.06□□□□□ -1.12
VARSP26640 SUMO2P8-201ENST00000434672 286 ntBASIC8.06□□□□□ -1.12
VARSP26640 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.06□□□□□ -1.12
VARSP26640 RAB9AP5-201ENST00000437794 597 ntBASIC8.06□□□□□ -1.12
VARSP26640 CLUHP5-201ENST00000438421 774 ntBASIC8.06□□□□□ -1.12
VARSP26640 AC007790.1-201ENST00000439081 782 ntBASIC8.06□□□□□ -1.12
VARSP26640 MTCYBP6-201ENST00000441810 138 ntBASIC8.06□□□□□ -1.12
VARSP26640 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
VARSP26640 AL022238.1-201ENST00000442557 355 ntBASIC8.06□□□□□ -1.12
VARSP26640 RAB9AP2-201ENST00000443911 597 ntBASIC8.06□□□□□ -1.12
VARSP26640 AL353898.1-201ENST00000444055 238 ntBASIC8.06□□□□□ -1.12
VARSP26640 RPSAP54-201ENST00000454001 886 ntBASIC8.06□□□□□ -1.12
VARSP26640 RAD23BP3-201ENST00000454157 1152 ntBASIC8.06□□□□□ -1.12
VARSP26640 RPS6P25-201ENST00000464444 748 ntBASIC8.06□□□□□ -1.12
VARSP26640 RN7SL841P-201ENST00000470547 297 ntBASIC8.06□□□□□ -1.12
VARSP26640 DAZAP2P1-201ENST00000475212 503 ntBASIC8.06□□□□□ -1.12
VARSP26640 RN7SL608P-201ENST00000492377 279 ntBASIC8.06□□□□□ -1.12
VARSP26640 RN7SKP197-201ENST00000517077 297 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms