Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LDLRP01130 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 RPS26P38-201ENST00000414476 348 ntBASIC6.12□□□□□ -1.43
LDLRP01130 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 AC099782.1-201ENST00000425889 474 ntBASIC6.12□□□□□ -1.43
LDLRP01130 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 GTF2IP14-201ENST00000441415 586 ntBASIC6.12□□□□□ -1.43
LDLRP01130 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.12□□□□□ -1.43
LDLRP01130 H3F3AP5-201ENST00000475267 429 ntBASIC6.12□□□□□ -1.43
LDLRP01130 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LDLRP01130 AC091965.3-201ENST00000506236 208 ntBASIC6.12□□□□□ -1.43
LDLRP01130 SNORA74.1-201ENST00000516320 180 ntBASIC6.12□□□□□ -1.43
LDLRP01130 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 RPL41P2-201ENST00000544920 409 ntBASIC6.12□□□□□ -1.43
LDLRP01130 CR383656.5-201ENST00000547616 1340 ntBASIC6.12□□□□□ -1.43
LDLRP01130 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 AL078601.3-201ENST00000573303 535 ntBASIC6.12□□□□□ -1.43
LDLRP01130 AC012146.2-201ENST00000576545 416 ntBASIC6.12□□□□□ -1.43
LDLRP01130 MIR4502-201ENST00000580432 81 ntBASIC6.12□□□□□ -1.43
LDLRP01130 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
LDLRP01130 AL352984.2-201ENST00000611153 546 ntBASIC6.12□□□□□ -1.43
LDLRP01130 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.12□□□□□ -1.43
LDLRP01130 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 AC020763.5-201ENST00000623298 430 ntBASIC6.12□□□□□ -1.43
LDLRP01130 AC114546.4-201ENST00000624413 369 ntBASIC6.12□□□□□ -1.43
LDLRP01130 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
LDLRP01130 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LDLRP01130 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LDLRP01130 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 MTCO1P8-201ENST00000416914 1523 ntBASIC6.11□□□□□ -1.43
LDLRP01130 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
LDLRP01130 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
LDLRP01130 RNA5SP140-201ENST00000364524 92 ntBASIC6.11□□□□□ -1.43
LDLRP01130 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.11□□□□□ -1.43
LDLRP01130 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.11□□□□□ -1.43
LDLRP01130 RPL12P23-201ENST00000405880 490 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AL590635.1-201ENST00000406314 586 ntBASIC6.11□□□□□ -1.43
LDLRP01130 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.11□□□□□ -1.43
LDLRP01130 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.11□□□□□ -1.43
LDLRP01130 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.11□□□□□ -1.43
LDLRP01130 LDHAP2-201ENST00000437325 985 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.11□□□□□ -1.43
LDLRP01130 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 RPL23AP28-201ENST00000448062 470 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 RPL23AP64-201ENST00000469465 435 ntBASIC6.11□□□□□ -1.43
LDLRP01130 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.11□□□□□ -1.43
LDLRP01130 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 RNA5SP441-201ENST00000516809 88 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.11□□□□□ -1.43
LDLRP01130 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.11□□□□□ -1.43
LDLRP01130 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.11□□□□□ -1.43
LDLRP01130 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AL136097.3-201ENST00000611097 505 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AC024255.1-201ENST00000614376 102 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AC005277.2-201ENST00000617898 390 ntBASIC6.11□□□□□ -1.43
LDLRP01130 AC026124.2-201ENST00000621847 656 ntBASIC6.11□□□□□ -1.43
LDLRP01130 MIR4302-201ENST00000638058 60 ntBASIC6.11□□□□□ -1.43
LDLRP01130 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
LDLRP01130 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.11□□□□□ -1.43
LDLRP01130 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LDLRP01130 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LDLRP01130 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.1□□□□□ -1.43
LDLRP01130 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.1□□□□□ -1.43
LDLRP01130 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms