Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Gm38285-201ENSMUST00000192928 922 ntBASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim42Q9D2H5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.02■□□□□ 0.31
Trim42Q9D2H5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim42Q9D2H5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Trim42Q9D2H5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Gm42778-201ENSMUST00000199644 553 ntBASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim42Q9D2H5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim42Q9D2H5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trim42Q9D2H5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17■□□□□ 0.31
Trim42Q9D2H5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trim42Q9D2H5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim42Q9D2H5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim42Q9D2H5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim42Q9D2H5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim42Q9D2H5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim42Q9D2H5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim42Q9D2H5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms