Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.63■□□□□ 0.25
Trim16Q99PP9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim16Q99PP9 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.63■□□□□ 0.25
Trim16Q99PP9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim16Q99PP9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.62■□□□□ 0.25
Trim16Q99PP9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.62■□□□□ 0.25
Trim16Q99PP9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.62■□□□□ 0.25
Trim16Q99PP9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim16Q99PP9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.61■□□□□ 0.25
Trim16Q99PP9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim16Q99PP9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Gm6576-201ENSMUST00000169678 883 ntBASIC16.6■□□□□ 0.25
Trim16Q99PP9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim16Q99PP9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim16Q99PP9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms