Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp1aQ921W0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Chmp1aQ921W0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Chmp1aQ921W0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.05■□□□□ 0
Chmp1aQ921W0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Chmp1aQ921W0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Chmp1aQ921W0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp1aQ921W0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Chmp1aQ921W0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Chmp1aQ921W0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.05■□□□□ -0
Chmp1aQ921W0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chmp1aQ921W0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chmp1aQ921W0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Chmp1aQ921W0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chmp1aQ921W0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chmp1aQ921W0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chmp1aQ921W0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp1aQ921W0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.03■□□□□ -0
Chmp1aQ921W0 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.03■□□□□ -0
Chmp1aQ921W0 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.03■□□□□ -0
Chmp1aQ921W0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chmp1aQ921W0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp1aQ921W0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Chmp1aQ921W0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp1aQ921W0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.02■□□□□ -0
Chmp1aQ921W0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.02■□□□□ -0
Chmp1aQ921W0 Gm10493-201ENSMUST00000097270 612 ntBASIC15.02■□□□□ -0
Chmp1aQ921W0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp1aQ921W0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Gm2399-201ENSMUST00000104944 225 ntBASIC15.01□□□□□ -0.01
Chmp1aQ921W0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1aQ921W0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms