Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Gm28033-201ENSMUST00000184224 96 ntBASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Gm27742-201ENSMUST00000184667 60 ntBASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhgb5Q91XX5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhgb5Q91XX5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Gm7153-201ENSMUST00000117092 455 ntBASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhgb5Q91XX5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Gm27357-201ENSMUST00000183754 135 ntBASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhgb5Q91XX5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhgb5Q91XX5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb5Q91XX5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Pcdhgb5Q91XX5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb5Q91XX5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhgb5Q91XX5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb5Q91XX5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms