Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.26■□□□□ 0.83
SIX5Q8N196 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.26■□□□□ 0.83
SIX5Q8N196 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
SIX5Q8N196 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.26■□□□□ 0.83
SIX5Q8N196 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.26■□□□□ 0.83
SIX5Q8N196 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIX5Q8N196 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SIX5Q8N196 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX5Q8N196 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SIX5Q8N196 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SIX5Q8N196 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.25■□□□□ 0.83
SIX5Q8N196 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
SIX5Q8N196 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.25■□□□□ 0.83
SIX5Q8N196 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.25■□□□□ 0.83
SIX5Q8N196 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
SIX5Q8N196 SLC25A1P4-201ENST00000567977 778 ntBASIC20.25■□□□□ 0.83
SIX5Q8N196 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX5Q8N196 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX5Q8N196 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX5Q8N196 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SIX5Q8N196 AP006587.1-201ENST00000534129 1502 ntBASIC20.24■□□□□ 0.83
SIX5Q8N196 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SIX5Q8N196 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX5Q8N196 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX5Q8N196 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX5Q8N196 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 KRT8P20-201ENST00000423953 1409 ntBASIC20.24■□□□□ 0.83
SIX5Q8N196 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.24■□□□□ 0.83
SIX5Q8N196 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIX5Q8N196 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX5Q8N196 PTBP1P-201ENST00000554374 1601 ntBASIC20.24■□□□□ 0.83
SIX5Q8N196 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.23■□□□□ 0.83
SIX5Q8N196 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX5Q8N196 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX5Q8N196 YBX1P2-201ENST00000489612 999 ntBASIC20.23■□□□□ 0.83
SIX5Q8N196 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX5Q8N196 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.23■□□□□ 0.83
SIX5Q8N196 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX5Q8N196 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SIX5Q8N196 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SIX5Q8N196 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX5Q8N196 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX5Q8N196 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SIX5Q8N196 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.22■□□□□ 0.83
SIX5Q8N196 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.22■□□□□ 0.83
SIX5Q8N196 AC026396.1-201ENST00000419388 421 ntBASIC20.22■□□□□ 0.83
SIX5Q8N196 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.22■□□□□ 0.83
SIX5Q8N196 TSPY5P-201ENST00000426936 936 ntBASIC20.22■□□□□ 0.83
SIX5Q8N196 AC004980.1-204ENST00000429707 299 ntBASIC20.22■□□□□ 0.83
SIX5Q8N196 FAM207BP-201ENST00000447172 505 ntBASIC20.22■□□□□ 0.83
SIX5Q8N196 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.22■□□□□ 0.83
SIX5Q8N196 AL138966.2-201ENST00000621997 464 ntBASIC20.22■□□□□ 0.83
SIX5Q8N196 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX5Q8N196 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX5Q8N196 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SIX5Q8N196 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SIX5Q8N196 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX5Q8N196 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SIX5Q8N196 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX5Q8N196 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX5Q8N196 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX5Q8N196 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX5Q8N196 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX5Q8N196 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.21■□□□□ 0.83
SIX5Q8N196 AC093458.2-201ENST00000623150 629 ntBASIC20.21■□□□□ 0.83
SIX5Q8N196 AC131212.4-201ENST00000623606 975 ntBASIC20.21■□□□□ 0.83
SIX5Q8N196 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX5Q8N196 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms