Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim23Q8BGX0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Gm7977-201ENSMUST00000193787 748 ntBASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim23Q8BGX0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Gm18958-201ENSMUST00000174258 762 ntBASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Gm7213-201ENSMUST00000215977 950 ntBASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim23Q8BGX0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Actl10-202ENSMUST00000226583 1501 ntBASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim23Q8BGX0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Gm10013-201ENSMUST00000106074 672 ntBASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Gm22697-201ENSMUST00000175194 63 ntBASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim23Q8BGX0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms