Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Mir7075-201ENSMUST00000184187 82 ntBASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3-3Q5R1C3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3-3Q5R1C3 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Gm7860-201ENSMUST00000121190 879 ntBASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Gm8493-201ENSMUST00000196881 489 ntBASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3-3Q5R1C3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav3-3Q5R1C3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms