Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf2P39429 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf2P39429 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Traf2P39429 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf2P39429 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Traf2P39429 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Traf2P39429 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Traf2P39429 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Traf2P39429 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.13■□□□□ 0.33
Traf2P39429 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.13■□□□□ 0.33
Traf2P39429 Gm11539-201ENSMUST00000119837 557 ntBASIC17.13■□□□□ 0.33
Traf2P39429 Gm13436-201ENSMUST00000120418 567 ntBASIC17.13■□□□□ 0.33
Traf2P39429 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Gm7791-201ENSMUST00000219066 539 ntBASIC17.13■□□□□ 0.33
Traf2P39429 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Traf2P39429 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Traf2P39429 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Traf2P39429 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Traf2P39429 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.12■□□□□ 0.33
Traf2P39429 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.12■□□□□ 0.33
Traf2P39429 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.12■□□□□ 0.33
Traf2P39429 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.12■□□□□ 0.33
Traf2P39429 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Traf2P39429 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Traf2P39429 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Gm27463-201ENSMUST00000183569 57 ntBASIC17.11■□□□□ 0.33
Traf2P39429 Gm43799-201ENSMUST00000201845 579 ntBASIC17.11■□□□□ 0.33
Traf2P39429 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Traf2P39429 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Traf2P39429 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Traf2P39429 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Traf2P39429 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.11■□□□□ 0.33
Traf2P39429 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Traf2P39429 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.11■□□□□ 0.33
Traf2P39429 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.1■□□□□ 0.33
Traf2P39429 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.1■□□□□ 0.33
Traf2P39429 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Traf2P39429 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Traf2P39429 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Traf2P39429 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.1■□□□□ 0.33
Traf2P39429 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Traf2P39429 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Traf2P39429 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Traf2P39429 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Traf2P39429 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms