Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.78□□□□□ -0.52
Smim1P0C8K7 Asic1-205ENSMUST00000228185 1818 ntBASIC11.78□□□□□ -0.52
Smim1P0C8K7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.78□□□□□ -0.52
Smim1P0C8K7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.78□□□□□ -0.52
Smim1P0C8K7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smim1P0C8K7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smim1P0C8K7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.77□□□□□ -0.53
Smim1P0C8K7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smim1P0C8K7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Gm22325-201ENSMUST00000158904 308 ntBASIC11.76□□□□□ -0.53
Smim1P0C8K7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smim1P0C8K7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC11.75□□□□□ -0.53
Smim1P0C8K7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.75□□□□□ -0.53
Smim1P0C8K7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC11.75□□□□□ -0.53
Smim1P0C8K7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms