Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SncaO55042 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SncaO55042 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SncaO55042 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SncaO55042 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Gm11643-201ENSMUST00000119578 864 ntBASIC14.11□□□□□ -0.15
SncaO55042 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.11□□□□□ -0.15
SncaO55042 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Mtag2-201ENSMUST00000058665 714 ntBASIC14.11□□□□□ -0.15
SncaO55042 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SncaO55042 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.11□□□□□ -0.15
SncaO55042 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SncaO55042 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SncaO55042 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.1□□□□□ -0.15
SncaO55042 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SncaO55042 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SncaO55042 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Gm13401-201ENSMUST00000117074 291 ntBASIC14.1□□□□□ -0.15
SncaO55042 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.1□□□□□ -0.15
SncaO55042 Gm10138-203ENSMUST00000206952 366 ntBASIC14.1□□□□□ -0.15
SncaO55042 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SncaO55042 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SncaO55042 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SncaO55042 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
SncaO55042 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.09□□□□□ -0.15
SncaO55042 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SncaO55042 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SncaO55042 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Gm12933-201ENSMUST00000120203 872 ntBASIC14.09□□□□□ -0.15
SncaO55042 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.09□□□□□ -0.15
SncaO55042 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.09□□□□□ -0.15
SncaO55042 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.09□□□□□ -0.15
SncaO55042 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SncaO55042 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SncaO55042 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SncaO55042 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SncaO55042 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.09□□□□□ -0.15
SncaO55042 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.09□□□□□ -0.15
SncaO55042 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SncaO55042 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SncaO55042 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SncaO55042 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SncaO55042 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SncaO55042 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SncaO55042 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SncaO55042 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
SncaO55042 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SncaO55042 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SncaO55042 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.08□□□□□ -0.16
SncaO55042 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SncaO55042 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SncaO55042 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms