Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Gm3854A0A1B0GSS6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Gm3854A0A1B0GSS6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Gm3854A0A1B0GSS6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm3854A0A1B0GSS6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3854A0A1B0GSS6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm3854A0A1B0GSS6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm3854A0A1B0GSS6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Birc2-201ENSMUST00000054878 378 ntBASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Phf7-203ENSMUST00000226565 1971 ntBASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm3854A0A1B0GSS6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.97■□□□□ 0.31
Gm3854A0A1B0GSS6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms