Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Igkv3-5A0A140T8M6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Igkv3-5A0A140T8M6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Rab3c-203ENSMUST00000224180 967 ntBASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Igkv3-5A0A140T8M6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv3-5A0A140T8M6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Igkv3-5A0A140T8M6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv3-5A0A140T8M6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Igkv3-5A0A140T8M6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Gm27405-201ENSMUST00000184201 112 ntBASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv3-5A0A140T8M6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms