Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Mir2861-201ENSMUST00000175539 82 ntBASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Timm23-208ENSMUST00000226683 750 ntBASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-1A0A0B4J1P8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms