Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Gm42778-201ENSMUST00000199644 553 ntBASIC13.2□□□□□ -0.3
Trav16A0A075B653 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16A0A075B653 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.19□□□□□ -0.3
Trav16A0A075B653 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16A0A075B653 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.18□□□□□ -0.3
Trav16A0A075B653 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.18□□□□□ -0.3
Trav16A0A075B653 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16A0A075B653 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.17□□□□□ -0.3
Trav16A0A075B653 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Gm13216-201ENSMUST00000117145 591 ntBASIC13.17□□□□□ -0.3
Trav16A0A075B653 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav16A0A075B653 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16A0A075B653 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.16□□□□□ -0.3
Trav16A0A075B653 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav16A0A075B653 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms