Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 RPL5P20-201ENST00000403848 896 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 USP24P1-201ENST00000433802 779 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 PSMD8P1-201ENST00000436275 769 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC092106.2-201ENST00000436597 487 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 RPS19P6-201ENST00000441327 433 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 UBE2V2P4-201ENST00000447495 259 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 RPS4XP17-201ENST00000479057 754 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 SCARNA5-201ENST00000516201 276 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 OR6M2P-201ENST00000529831 871 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 RPA2P3-201ENST00000533268 770 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC090616.1-201ENST00000583895 447 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AL390877.1-201ENST00000605704 214 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR6085-201ENST00000618314 110 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR6503-201ENST00000622884 86 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AL109924.4-201ENST00000623089 670 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC073488.9-201ENST00000631601 754 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCNB1IP1Q9NPC3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCNB1IP1Q9NPC3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.71□□□□□ -1.49
CCNB1IP1Q9NPC3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CCNB1IP1Q9NPC3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC093671.1-201ENST00000624981 2929 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 MRPS6P2-201ENST00000381143 370 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL354766.1-201ENST00000423396 542 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL645939.3-201ENST00000435408 225 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RPS3AP38-201ENST00000435889 763 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 HMGN1P32-201ENST00000441744 256 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 WDR82P2-201ENST00000444540 928 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 CCNJP1-201ENST00000450600 1149 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC112187.1-201ENST00000455837 479 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC022730.1-201ENST00000473114 568 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RPS7P11-201ENST00000484240 586 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC084851.2-201ENST00000530377 364 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 HMGN1P26-201ENST00000558737 303 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC024267.2-201ENST00000582737 417 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 SYPL1P2-201ENST00000582878 727 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 MIR132-201ENST00000591554 101 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC114477.1-201ENST00000605097 605 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 AC019257.2-201ENST00000605539 497 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 MIR6849-201ENST00000618543 69 ntBASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCNB1IP1Q9NPC3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms