Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TPT1P8-201ENST00000510120 555 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 TRIM51DP-201ENST00000529746 596 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC036111.2-201ENST00000533247 901 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 TPRX1P1-201ENST00000557620 319 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC027216.1-201ENST00000577726 685 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AL157899.1-201ENST00000604110 936 ntBASIC7.29□□□□□ -1.24
VTA1Q9NP79 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VTA1Q9NP79 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.29□□□□□ -1.24
VTA1Q9NP79 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL669831.5-218ENST00000591702 1873 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC110792.3-201ENST00000595906 1614 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 PTGES3P2-201ENST00000407942 482 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 MTND4P11-201ENST00000417020 1058 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 DNAJA1P5-201ENST00000440278 943 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC009963.4-201ENST00000448535 339 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 RPL12P31-201ENST00000478433 450 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 RPL12P30-201ENST00000488389 499 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 KHDC1P1-201ENST00000511053 508 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 MTND2P17-201ENST00000550281 688 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CKS1BP1-201ENST00000555221 240 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 MIR4701-201ENST00000583094 63 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL133247.2-201ENST00000603236 482 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL080312.2-201ENST00000613001 630 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 AP001264.1-201ENST00000620602 703 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 MROH3P-201ENST00000435735 2676 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AC138915.4-201ENST00000565549 4147 ntBASIC7.28□□□□□ -1.24
VTA1Q9NP79 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VTA1Q9NP79 AL031651.1-201ENST00000615357 1438 ntBASIC7.27□□□□□ -1.24
VTA1Q9NP79 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.27□□□□□ -1.25
VTA1Q9NP79 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VTA1Q9NP79 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms