Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 UBBP5-201ENST00000446970 266 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.8□□□□□ -1.64
VGLL1Q99990 HSFY5P-201ENST00000453726 309 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 CYCSP53-201ENST00000455540 265 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AL022319.1-201ENST00000458183 1167 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.8□□□□□ -1.64
VGLL1Q99990 SLC25A51P1-201ENST00000468432 871 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC090602.1-201ENST00000469695 252 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.8□□□□□ -1.64
VGLL1Q99990 AC106800.3-201ENST00000511389 308 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.8□□□□□ -1.64
VGLL1Q99990 RBMS2P1-201ENST00000525031 1226 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VGLL1Q99990 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.8□□□□□ -1.64
VGLL1Q99990 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.8□□□□□ -1.64
VGLL1Q99990 MIR4312-201ENST00000579909 76 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.8□□□□□ -1.64
VGLL1Q99990 AC090616.1-201ENST00000583895 447 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.8□□□□□ -1.64
VGLL1Q99990 AC092944.2-201ENST00000605443 889 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC019257.2-201ENST00000605539 497 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC023206.1-201ENST00000605824 298 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC015802.5-201ENST00000607478 399 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AL008723.3-201ENST00000608926 449 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 AC093388.1-201ENST00000609166 430 ntBASIC4.8□□□□□ -1.64
VGLL1Q99990 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.8□□□□□ -1.64
VGLL1Q99990 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VGLL1Q99990 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VGLL1Q99990 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.8□□□□□ -1.64
VGLL1Q99990 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VGLL1Q99990 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VGLL1Q99990 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.8□□□□□ -1.64
VGLL1Q99990 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
VGLL1Q99990 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VGLL1Q99990 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 MTCO1P22-201ENST00000604619 1360 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VGLL1Q99990 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AL121839.2-201ENST00000565058 6943 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 MT-RNR1-201ENST00000389680 954 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 PEX12P1-201ENST00000400284 1048 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 RANP6-201ENST00000413691 644 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.79□□□□□ -1.64
VGLL1Q99990 YWHAZP5-201ENST00000419975 730 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AC007562.1-201ENST00000421819 517 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 SETP9-201ENST00000423837 832 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AHCYP8-201ENST00000425108 209 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 MTND4P15-201ENST00000437913 1033 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AL592114.2-201ENST00000440142 532 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC023274.2-201ENST00000445264 521 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 VN1R48P-201ENST00000448149 1036 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 snoU13.29-201ENST00000459370 104 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AC092905.1-201ENST00000467527 949 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 MORF4L2P1-201ENST00000503761 858 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC103855.4-201ENST00000533158 265 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.79□□□□□ -1.64
VGLL1Q99990 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC009120.3-201ENST00000563335 499 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC4.79□□□□□ -1.64
VGLL1Q99990 RN7SL131P-201ENST00000579043 256 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AC016590.3-201ENST00000611171 753 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.79□□□□□ -1.64
VGLL1Q99990 AL121985.3-201ENST00000620690 523 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 AL359742.1-201ENST00000622497 540 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AL162377.2-201ENST00000624532 337 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 AC006453.3-201ENST00000635891 377 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.79□□□□□ -1.64
VGLL1Q99990 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VGLL1Q99990 AL355834.1-201ENST00000556602 3965 ntBASIC4.79□□□□□ -1.64
VGLL1Q99990 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
VGLL1Q99990 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 AC010132.4-201ENST00000569883 1368 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 HSPD1P1-201ENST00000503199 1726 ntBASIC4.78□□□□□ -1.64
VGLL1Q99990 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VGLL1Q99990 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms