Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC091133.5-201ENST00000603088 301 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL021368.3-201ENST00000607119 578 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC116165.3-201ENST00000614524 400 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 MIR6736-201ENST00000616799 59 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AP003108.4-201ENST00000623917 878 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL121977.1-201ENST00000401636 979 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 RN7SKP117-201ENST00000410175 264 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL596268.1-201ENST00000427910 1048 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 UBE2V2P3-201ENST00000433562 437 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 RPL3P11-201ENST00000434028 1146 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC108751.3-201ENST00000461814 1020 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 RPL7AP30-201ENST00000482859 796 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 RPL19P11-201ENST00000495944 589 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC138409.2-202ENST00000507274 458 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 Vault.2-201ENST00000516519 98 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 MTND2P17-201ENST00000550281 688 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 RN7SL208P-201ENST00000577964 296 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC010487.1-201ENST00000594408 1172 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC092944.2-201ENST00000605443 889 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC138473.1-201ENST00000605717 526 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC093635.1-201ENST00000609028 555 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 MTCO1P1-201ENST00000624263 1081 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC116667.2-201ENST00000641075 823 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFT1Q96AA3 SAGE3P-201ENST00000619800 1635 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.55□□□□□ -1.52
RFT1Q96AA3 AC010132.4-201ENST00000569883 1368 ntBASIC5.55□□□□□ -1.52
RFT1Q96AA3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFT1Q96AA3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.54□□□□□ -1.52
RFT1Q96AA3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms