Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.2□□□□□ -1.74
RPL39P62891 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.2□□□□□ -1.74
RPL39P62891 AL079303.1-201ENST00000486611 463 ntBASIC4.2□□□□□ -1.74
RPL39P62891 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.2□□□□□ -1.74
RPL39P62891 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 OR4D12P-201ENST00000509361 911 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.2□□□□□ -1.74
RPL39P62891 AC090424.1-201ENST00000535243 736 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.2□□□□□ -1.74
RPL39P62891 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.2□□□□□ -1.74
RPL39P62891 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC4.2□□□□□ -1.74
RPL39P62891 AC096708.4-201ENST00000620563 552 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AC099654.15-201ENST00000639802 509 ntBASIC4.2□□□□□ -1.74
RPL39P62891 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RPL39P62891 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.2□□□□□ -1.74
RPL39P62891 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RPL39P62891 AC140479.2-201ENST00000421567 3130 ntBASIC4.2□□□□□ -1.74
RPL39P62891 AC011416.1-201ENST00000514947 1732 ntBASIC4.2□□□□□ -1.74
RPL39P62891 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RPL39P62891 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 AL158152.1-201ENST00000602652 1435 ntBASIC4.2□□□□□ -1.74
RPL39P62891 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RPL39P62891 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.19□□□□□ -1.74
RPL39P62891 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RPL39P62891 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
RPL39P62891 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 MIR133A2-201ENST00000347538 102 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 AC002127.1-201ENST00000421305 225 ntBASIC4.19□□□□□ -1.74
RPL39P62891 OR5W1P-201ENST00000423705 938 ntBASIC4.19□□□□□ -1.74
RPL39P62891 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 GTF3AP6-201ENST00000432585 986 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC242426.1-201ENST00000435270 960 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 AC019185.3-201ENST00000438805 323 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 REG1CP-206ENST00000447469 496 ntBASIC4.19□□□□□ -1.74
RPL39P62891 SDC4P-201ENST00000453285 601 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.19□□□□□ -1.74
RPL39P62891 RN7SL413P-201ENST00000482700 297 ntBASIC4.19□□□□□ -1.74
RPL39P62891 CR383656.1-201ENST00000484916 377 ntBASIC4.19□□□□□ -1.74
RPL39P62891 PDCL3P4-201ENST00000489621 720 ntBASIC4.19□□□□□ -1.74
RPL39P62891 GM2AP2-201ENST00000491764 562 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 RN7SKP64-201ENST00000517206 328 ntBASIC4.19□□□□□ -1.74
RPL39P62891 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC103855.4-201ENST00000533158 265 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.19□□□□□ -1.74
RPL39P62891 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 AC126615.2-201ENST00000553003 515 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.19□□□□□ -1.74
RPL39P62891 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 AC015674.1-201ENST00000578482 267 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 AC119403.2-201ENST00000590960 598 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.19□□□□□ -1.74
RPL39P62891 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 AL589743.6-201ENST00000611025 117 ntBASIC4.19□□□□□ -1.74
RPL39P62891 AL355974.3-201ENST00000617383 467 ntBASIC4.19□□□□□ -1.74
RPL39P62891 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 LINC01808-203ENST00000641932 1643 ntBASIC4.19□□□□□ -1.74
RPL39P62891 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
RPL39P62891 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 AP002991.2-201ENST00000623807 2801 ntBASIC4.19□□□□□ -1.74
RPL39P62891 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 PARP4P2-201ENST00000446672 3326 ntBASIC4.19□□□□□ -1.74
RPL39P62891 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
RPL39P62891 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.19□□□□□ -1.74
RPL39P62891 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPL39P62891 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
RPL39P62891 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 AC004023.1-201ENST00000561473 1744 ntBASIC4.18□□□□□ -1.74
RPL39P62891 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPL39P62891 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
RPL39P62891 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RPL39P62891 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms