Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LMO4P61968 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LMO4P61968 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 BIN2P1-201ENST00000504996 1530 ntBASIC5.09□□□□□ -1.59
LMO4P61968 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 AC092821.3-202ENST00000641304 2767 ntBASIC5.09□□□□□ -1.59
LMO4P61968 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.09□□□□□ -1.59
LMO4P61968 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LMO4P61968 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LMO4P61968 RNA5SP510-201ENST00000364697 99 ntBASIC5.09□□□□□ -1.59
LMO4P61968 RN7SKP78-201ENST00000364711 318 ntBASIC5.09□□□□□ -1.59
LMO4P61968 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 AL096711.1-201ENST00000404780 554 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AL096829.1-201ENST00000413677 457 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AC019070.1-201ENST00000415008 1024 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 AC104843.2-201ENST00000427666 297 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 ZNF619P1-201ENST00000446539 752 ntBASIC5.09□□□□□ -1.59
LMO4P61968 SETP20-201ENST00000457046 852 ntBASIC5.09□□□□□ -1.59
LMO4P61968 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AC092865.4-201ENST00000477936 615 ntBASIC5.09□□□□□ -1.59
LMO4P61968 RPL7P51-201ENST00000490532 749 ntBASIC5.09□□□□□ -1.59
LMO4P61968 RN7SL193P-201ENST00000491708 276 ntBASIC5.09□□□□□ -1.59
LMO4P61968 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 RNA5SP438-201ENST00000516561 112 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 RPA2P3-201ENST00000533268 770 ntBASIC5.09□□□□□ -1.59
LMO4P61968 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 AC008521.2-201ENST00000591021 259 ntBASIC5.09□□□□□ -1.59
LMO4P61968 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.09□□□□□ -1.59
LMO4P61968 AL645933.2-201ENST00000606743 1207 ntBASIC5.09□□□□□ -1.59
LMO4P61968 MIR6809-201ENST00000612189 116 ntBASIC5.09□□□□□ -1.59
LMO4P61968 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.09□□□□□ -1.59
LMO4P61968 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.09□□□□□ -1.59
LMO4P61968 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LMO4P61968 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
LMO4P61968 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LMO4P61968 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
LMO4P61968 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LMO4P61968 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LMO4P61968 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LMO4P61968 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LMO4P61968 AL731556.1-201ENST00000394628 3711 ntBASIC5.09□□□□□ -1.6
LMO4P61968 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LMO4P61968 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.09□□□□□ -1.6
LMO4P61968 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LMO4P61968 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.08□□□□□ -1.6
LMO4P61968 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LMO4P61968 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 RNU11-6P-201ENST00000391127 133 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AL031985.1-201ENST00000392713 418 ntBASIC5.08□□□□□ -1.6
LMO4P61968 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 MTND2P11-201ENST00000423638 648 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO4P61968 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.08□□□□□ -1.6
LMO4P61968 RPL23AP19-201ENST00000436229 369 ntBASIC5.08□□□□□ -1.6
LMO4P61968 VN1R110P-201ENST00000438988 971 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LMO4P61968 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.08□□□□□ -1.6
LMO4P61968 OR2AF1P-201ENST00000454899 889 ntBASIC5.08□□□□□ -1.6
LMO4P61968 ACA64.1-201ENST00000459171 127 ntBASIC5.08□□□□□ -1.6
LMO4P61968 AC090589.1-201ENST00000473109 362 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms