Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL136228.1-201ENST00000622221 319 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.01□□□□□ -1.45
CLDN6P56747 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CLDN6P56747 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.01□□□□□ -1.45
CLDN6P56747 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 Z93929.1-201ENST00000418200 1475 ntBASIC6.01□□□□□ -1.45
CLDN6P56747 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.01□□□□□ -1.45
CLDN6P56747 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLDN6P56747 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLDN6P56747 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 AP000866.6-201ENST00000638898 3579 ntBASIC6□□□□□ -1.45
CLDN6P56747 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 AC005034.3-201ENST00000604845 1747 ntBASIC6□□□□□ -1.45
CLDN6P56747 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLDN6P56747 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 RNU1-46P-201ENST00000384425 164 ntBASIC6□□□□□ -1.45
CLDN6P56747 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 BX119321.1-201ENST00000428912 797 ntBASIC6□□□□□ -1.45
CLDN6P56747 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 AC016908.1-201ENST00000442571 1219 ntBASIC6□□□□□ -1.45
CLDN6P56747 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6□□□□□ -1.45
CLDN6P56747 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 AC008638.1-201ENST00000506035 866 ntBASIC6□□□□□ -1.45
CLDN6P56747 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 AC253576.1-201ENST00000511645 1156 ntBASIC6□□□□□ -1.45
CLDN6P56747 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6□□□□□ -1.45
CLDN6P56747 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6□□□□□ -1.45
CLDN6P56747 RNA5SP440-201ENST00000612665 119 ntBASIC6□□□□□ -1.45
CLDN6P56747 AC079414.3-201ENST00000612986 1090 ntBASIC6□□□□□ -1.45
CLDN6P56747 AC079776.5-201ENST00000641920 211 ntBASIC6□□□□□ -1.45
CLDN6P56747 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLDN6P56747 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 AC007485.2-201ENST00000623493 1667 ntBASIC6□□□□□ -1.45
CLDN6P56747 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6□□□□□ -1.45
CLDN6P56747 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 AP002833.3-201ENST00000625075 2265 ntBASIC6□□□□□ -1.45
CLDN6P56747 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLDN6P56747 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLDN6P56747 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLDN6P56747 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 RBPJP7-201ENST00000442803 1447 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 RBPJP5-201ENST00000449433 1447 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLDN6P56747 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 CR788268.1-201ENST00000603931 1809 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CLDN6P56747 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CLDN6P56747 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 AL391361.1-201ENST00000405580 489 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 MIR1203-201ENST00000408812 85 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 AC245060.4-201ENST00000413293 1121 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN6P56747 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.99□□□□□ -1.45
CLDN6P56747 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN6P56747 RN7SL326P-201ENST00000477493 296 ntBASIC5.99□□□□□ -1.45
CLDN6P56747 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN6P56747 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.99□□□□□ -1.45
CLDN6P56747 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.99□□□□□ -1.45
CLDN6P56747 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.99□□□□□ -1.45
CLDN6P56747 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.99□□□□□ -1.45
CLDN6P56747 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.99□□□□□ -1.45
CLDN6P56747 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.99□□□□□ -1.45
CLDN6P56747 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.99□□□□□ -1.45
CLDN6P56747 AC099654.11-201ENST00000638857 294 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms