Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.05□□□□□ -1.28
PTPN1P18031 CR788268.1-201ENST00000603931 1809 ntBASIC7.05□□□□□ -1.28
PTPN1P18031 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PTPN1P18031 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.05□□□□□ -1.28
PTPN1P18031 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PTPN1P18031 PCF11-AS1-201ENST00000602322 1516 ntBASIC7.05□□□□□ -1.28
PTPN1P18031 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
PTPN1P18031 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PTPN1P18031 MAPK10-357ENST00000641831 2858 ntBASIC7.05□□□□□ -1.28
PTPN1P18031 MTCO1P25-201ENST00000414449 1799 ntBASIC7.05□□□□□ -1.28
PTPN1P18031 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PTPN1P18031 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
PTPN1P18031 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PTPN1P18031 AC217777.1-201ENST00000570034 1471 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.04□□□□□ -1.28
PTPN1P18031 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC007485.2-201ENST00000623493 1667 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
PTPN1P18031 MTCO2P31-201ENST00000402702 684 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AL589994.1-201ENST00000404962 340 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AL049697.3-201ENST00000406493 982 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 AC096537.2-201ENST00000413707 714 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 NPM1P36-201ENST00000415681 835 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC005005.2-201ENST00000420779 380 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AL096829.2-201ENST00000446582 742 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 TVP23CP1-201ENST00000450317 639 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC004890.1-201ENST00000461005 181 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 RN7SL836P-201ENST00000476140 296 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC112673.1-201ENST00000513168 575 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC138517.1-201ENST00000515724 568 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC118942.1-201ENST00000529674 1035 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 OR4A41P-201ENST00000533053 928 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.04□□□□□ -1.28
PTPN1P18031 AP001357.1-201ENST00000586304 1053 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC093635.1-201ENST00000609028 555 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 AC015819.1-201ENST00000613588 663 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC079395.3-201ENST00000615161 484 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 CYCSP41-201ENST00000616920 296 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 AC005277.2-201ENST00000617898 390 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 AC132825.7-201ENST00000638744 335 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PTPN1P18031 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 CLCA3P-203ENST00000490028 2781 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 MTND5P31-201ENST00000419366 1374 ntBASIC7.04□□□□□ -1.28
PTPN1P18031 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PTPN1P18031 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PTPN1P18031 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.04□□□□□ -1.28
PTPN1P18031 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PTPN1P18031 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.03□□□□□ -1.28
PTPN1P18031 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 ZNF29P-201ENST00000225587 168 ntBASIC7.03□□□□□ -1.28
PTPN1P18031 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PTPN1P18031 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PTPN1P18031 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 RPL22P22-201ENST00000395439 379 ntBASIC7.03□□□□□ -1.28
PTPN1P18031 AL050305.1-201ENST00000399993 1230 ntBASIC7.03□□□□□ -1.28
PTPN1P18031 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 MTCO1P51-201ENST00000427672 1060 ntBASIC7.03□□□□□ -1.28
PTPN1P18031 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PTPN1P18031 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.03□□□□□ -1.28
PTPN1P18031 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms