Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
SND1-IT1Q9HBX3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC083837.1-201ENST00000565297 2994 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 PPIAP24-201ENST00000328558 471 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 RNA5SP453-201ENST00000362503 119 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 SNORD16-201ENST00000362803 99 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 SNORA11D-201ENST00000408548 128 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 SNORA11E-201ENST00000408778 128 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 RNU2-5P-201ENST00000410533 180 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 RPL12P10-201ENST00000413498 498 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AL596268.1-201ENST00000427910 1048 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CBX5P1-201ENST00000468470 561 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC012123.2-201ENST00000485809 248 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC093878.1-201ENST00000515630 432 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 HNRNPCP8-201ENST00000528764 888 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 RPA2P3-201ENST00000533268 770 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC125494.2-201ENST00000602431 657 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC096586.2-201ENST00000610260 441 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC006924.1-201ENST00000610750 559 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 TUBBP10-201ENST00000427668 1301 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC126474.2-201ENST00000623268 1750 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC138907.8-201ENST00000623981 2256 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 HDAC1P2-201ENST00000453661 1398 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC004076.2-201ENST00000620532 3323 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 AC026523.2-201ENST00000625039 7739 ntBASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.11□□□□□ -1.75
SND1-IT1Q9HBX3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC095038.1-201ENST00000429248 1591 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC020633.1-201ENST00000468439 2247 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 MIPEPP2-201ENST00000422560 1819 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AL445238.1-204ENST00000400311 463 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 SOD1P1-201ENST00000407803 440 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SKP281-201ENST00000410472 352 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC009506.2-201ENST00000420635 840 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 CR391992.1-201ENST00000438601 394 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AL139135.2-201ENST00000445040 433 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms